ggKbase home page

SCNpilot_cont_500_bf_scaffold_175

Search features with annotation key words

Displaying items 31-60 of 322 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_175_31
unknown

Not on your lists

44761..45288
DNA (528bp) protein (176aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_175_32
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

Not on your lists


45434..45859
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PLZ0_9BACT
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
rplK; ribosomal protein L11 (BL11)
SCNpilot_cont_500_bf_scaffold_175_33
RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(45920..46780)
DNA (861bp) protein (287aa)
Tax=RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated
SCNpilot_cont_500_bf_scaffold_175_34
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(46789..48453)
DNA (1665bp) protein (555aa)
Oxidoreductase (Fragment) id=3887356 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
putative oxidoreductase rbh
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_175_35
GWA2_ACD58_46_7, Berkelbacteria, Bacteria

Not on your lists

48575..49066
DNA (492bp) protein (164aa)
Uncharacterized protein (Fragment) n=1 Tax=Phanerochaete carnosa HHB-10118-sp RepID=K5URP3_PHACS id=725745 bin=RAAC2_WWE3 species=Phanerochaete carnosa genus=Phanerochaete taxon_order=Corticiales taxon_class=Agaricomycetes phylum=Basidiomycota tax=RAAC2_WWE3 organism_group=WWE3
Uncharacterized protein {ECO:0000313|EMBL:KKU43814.1}; TaxID=1618335 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_46_7.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_175_36
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

49056..49763
DNA (708bp) protein (236aa)
NUDIX hydrolase id=3887239 bin=GWC2_TM7_48_9 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
NUDIX hydrolase {ECO:0000313|EMBL:KKW03331.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
putative NUDIX hydrolase
SCNpilot_cont_500_bf_scaffold_175_37
RHI_Saccharibacteria_41_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(49760..50704)
DNA (945bp) protein (315aa)
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_41_12_curated
SCNpilot_cont_500_bf_scaffold_175_38

Not on your lists


50885..51910
DNA (1026bp) protein (342aa)
50S ribosomal protein L1 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B21A8 rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rplA; 50S ribosomal protein L1 rbh
SCNpilot_cont_500_bf_scaffold_175_39
unknown

Not on your lists

comp(51975..52718)
DNA (744bp) protein (248aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_175_40
unknown

Not on your lists

comp(52769..52861)
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_175_41
unknown

Not on your lists

52867..52983
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_175_42

Not on your lists

52937..54133
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZI38_9BACT
Glycosyl transferases group 1 {ECO:0000313|EMBL:AIA18747.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
group 1 glycosyl transferase
SCNpilot_cont_500_bf_scaffold_175_43

Not on your lists

comp(54123..54935)
DNA (813bp) protein (271aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Thymidylate synthase n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSZ1_9BACT rbh
thymidylate synthase
SCNpilot_cont_500_bf_scaffold_175_44
candidate division TM7 genomosp. GTL1, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(54940..55902)
DNA (963bp) protein (321aa)
comEB; late competence operon required for DNA binding and uptake; K01493 dCMP deaminase [EC:3.5.4.12]
Histidine triad (HIT) protein (Fragment) n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KT99_9BACT rbh
Histidine triad (HIT) protein {ECO:0000313|EMBL:EDK72339.1}; Flags: Fragment;; TaxID=443342 species="Bacteria; Candidatus Saccharibacteria.;" source="candidate division TM7 genomosp. GTL1.;"
SCNpilot_cont_500_bf_scaffold_175_45

Not on your lists

comp(55895..56416)
DNA (522bp) protein (174aa)
Histidine triad (HIT) protein (Fragment) n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KT99_9BACT
HIT domain protein {ECO:0000313|EMBL:AIA15105.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
histidine triad (HIT) protein
SCNpilot_cont_500_bf_scaffold_175_46

Not on your lists

comp(56421..56975)
DNA (555bp) protein (185aa)
Cytidyltransferase-related domain n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSY9_9BACT rbh
Cytidyltransferase-like domain {ECO:0000313|EMBL:AIA10732.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rfaE bifunctional protein
SCNpilot_cont_500_bf_scaffold_175_47

Not on your lists

comp(56998..57951)
DNA (954bp) protein (318aa)
homoserine kinase (EC:2.7.1.39); K02204 homoserine kinase type II [EC:2.7.1.39]
Putative homoserine kinase type II (Protein kinase fold)-like protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSY8_9BACT
Phosphotransferase enzyme family {ECO:0000313|EMBL:AIA17459.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_500_bf_scaffold_175_48
Parcubacteria bacterium GW2011_GWB1_49_7, Parcubacteria, Bacteria

Not on your lists

comp(57952..58443)
DNA (492bp) protein (164aa)
folA; dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GN39_9SPHI
Dihydrofolate reductase {ECO:0000313|EMBL:KKW09721.1}; TaxID=1618883 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_49_7.;"
SCNpilot_cont_500_bf_scaffold_175_49
unknown

Not on your lists

comp(58484..59389)
DNA (906bp) protein (302aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_175_50
unknown

Not on your lists

comp(59527..59766)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_175_51
unknown

Not on your lists

comp(59766..59930)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_175_52
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists


60291..60815
DNA (525bp) protein (175aa)
50S ribosomal protein L10 id=2440404 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rplJ; 50S ribosomal protein L10
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_175_53
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists


60885..61043
DNA (159bp) protein (53aa)
50S ribosomal protein L7/L12 id=2440402 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_175_54
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists


61000..61197
DNA (198bp) protein (66aa)
50S ribosomal protein L7/L12 id=5226629 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
rplL; ribosomal protein L12 (BL9)
SCNpilot_cont_500_bf_scaffold_175_55
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(61267..62079)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PXS2_9BACT
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_175_56
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(62063..62479)
DNA (417bp) protein (139aa)
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_175_57
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(62507..64069)
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A6N3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84221.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_175_58
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(64382..64762)
DNA (381bp) protein (127aa)
chromosome condensation regulator RCC1 id=5225946 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_175_59
candidate division TM7 genomosp. GTL1, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(64814..67117)
DNA (2304bp) protein (768aa)
Regulator of chromosome condensation RCC1 n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRS2_9BACT
Regulator of chromosome condensation RCC1 {ECO:0000313|EMBL:EDK72869.1}; TaxID=443342 species="Bacteria; Candidatus Saccharibacteria.;" source="candidate division TM7 genomosp. GTL1.;"
regulator of chromosome condensation, RCC1
SCNpilot_cont_500_bf_scaffold_175_60
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists


67295..67813
DNA (519bp) protein (173aa)
50S ribosomal protein L7/L12 id=5226628 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
50S ribosomal protein L7/L12 {ECO:0000313|EMBL:AHB42564.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
hypothetical protein
Displaying items 31-60 of 322 in total

View Taxonomy