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SCNpilot_cont_500_bf_scaffold_233

Search features with annotation key words

Displaying items 121-150 of 204 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_233_115
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

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comp(117842..119158)
DNA (1317bp) protein (439aa)
Multidrug resistance protein id=4339265 bin=GWC2_TM7_48_9 species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
Multidrug resistance protein {ECO:0000313|EMBL:KKW02597.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
major facilitator superfamily transporter
SCNpilot_cont_500_bf_scaffold_233_116
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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119219..119485
DNA (267bp) protein (89aa)
30S ribosomal protein S15 id=4041787 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rpsO; ribosomal protein S15 (BS18)
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_233_117
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

119525..121342
DNA (1818bp) protein (606aa)
Lipid A export ATP-binding/permease protein MsbA id=2442675 bin=GWC2_TM7_44_17 species=unknown genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
putative ABC transporter related protein rbh
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_233_118
unknown

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121415..123019
DNA (1605bp) protein (535aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_233_119
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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123057..123962
DNA (906bp) protein (302aa)
ABC transporter related protein id=4041791 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
ABC transporter ATP-binding protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_233_120
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

123955..124743
DNA (789bp) protein (263aa)
Putative uncharacterized protein id=4041792 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
ABC transporter permease
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_233_121
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

124740..125117
DNA (378bp) protein (126aa)
Archaea-specific enzyme related to ProFAR isomerase, putative id=3133631 bin=GWC2_TM7_48_9 species=Populus trichocarpa genus=Populus taxon_order=Malpighiales taxon_class=unknown phylum=Streptophyta tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
isomerase
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_233_122
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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125139..125522
DNA (384bp) protein (128aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
putative peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
peptidyl-prolyl cis-trans isomerase id=5226518 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
SCNpilot_cont_500_bf_scaffold_233_123
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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125594..126154
DNA (561bp) protein (187aa)
hypothetical protein cdivTM_12329 id=2443936 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7a genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_233_124
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

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126194..126943
DNA (750bp) protein (250aa)
Fimbrial protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RWI8_9BACT
exported protein of unknown function
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_233_125
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

126940..127584
DNA (645bp) protein (215aa)
putative Glutamate racemase (EC:5.1.1.3)
Putative Glutamate racemase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PND6_9BACT
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_233_126
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

128205..130331
DNA (2127bp) protein (709aa)
putative polynucleotide phosphorylase (PNPase) (EC:2.7.7.8 3.1.13.1) rbh
Polyribonucleotide nucleotidyltransferase id=4041796 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_233_127
unknown

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130367..131116
DNA (750bp) protein (250aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_233_128
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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131204..131701
DNA (498bp) protein (166aa)
UPI0003CDD79C related cluster n=1 Tax=unknown RepID=UPI0003CDD79C
Uncharacterized protein {ECO:0000313|EMBL:ESY64241.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_233_129
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

131739..133406
DNA (1668bp) protein (556aa)
ATPase component of ABC transporter with duplicated ATPase domains id=2439673 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
ABC transporter-like protein
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_233_130
unknown

Not on your lists

133467..134279
DNA (813bp) protein (271aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_233_131
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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134281..134871
DNA (591bp) protein (197aa)
Phage SPO1 DNA polymerase-related protein id=4041799 bin=GWC2_TM7_44_17 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Phage SPO1 DNA polymerase-related protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_233_132
unknown

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comp(134928..135449)
DNA (522bp) protein (174aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_233_133
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

135733..137922
DNA (2190bp) protein (730aa)
Beta-lactamase domain protein id=4041801 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Beta-lactamase domain protein rbh
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_233_134
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

138007..140274
DNA (2268bp) protein (756aa)
id=5226341 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
putative cell division FtsK/SpoIIIE rbh
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_233_135
unknown

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140349..140888
DNA (540bp) protein (180aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_233_136
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

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141077..141439
DNA (363bp) protein (121aa)
SSU ribosomal protein S6P id=4827936 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
SSU ribosomal protein S6P {ECO:0000313|EMBL:KKW01794.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
rpsF; ribosomal protein S6
SCNpilot_cont_500_bf_scaffold_233_137
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

141480..141923
DNA (444bp) protein (148aa)
single-strand binding protein id=5226344 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
putative Single-stranded DNA-binding protein 1
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_233_138
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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141964..142164
DNA (201bp) protein (67aa)
ribosomal protein S18 id=4041919 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7a genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rpsR; 30S ribosomal protein S18
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_233_139
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

142174..142743
DNA (570bp) protein (190aa)
translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) id=4041920 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7a genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
putative Elongation factor P
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_233_140
unknown

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142752..143246
DNA (495bp) protein (165aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_233_141
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

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143243..143974
DNA (732bp) protein (244aa)
putative rRNA methyltransferase YqxC (EC:2.1.1.-) rbh
Hemolysin A, partial id=4827930 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_233_142
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(143951..144925)
DNA (975bp) protein (325aa)
transmembrane_regions id=5226046 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Uncharacterized protein {ECO:0000313|EMBL:AHB41981.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
putative capsular polysaccharide synthesis protein
SCNpilot_cont_500_bf_scaffold_233_143
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(144965..146047)
DNA (1083bp) protein (361aa)
GTP-binding protein YchF n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RWG0_9BACT rbh
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
ychF; GTP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_233_144
unknown

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comp(146245..147015)
DNA (771bp) protein (257aa)

This feature has no annotations

Displaying items 121-150 of 204 in total

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