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SCNpilot_cont_500_bf_scaffold_190

Search features with annotation key words

Displaying items 91-120 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_190_91
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(88750..89904)
DNA (1155bp) protein (385aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Mycobacterium gilvum (strain PYR-GCK) RepID=A4TFJ1_MYCGI rbh
Mycobacterium llatzerense strain CLUC14 Mllat_contig000007, whole genome shotgun sequence {ECO:0000313|EMBL:KIU17611.1}; TaxID=280871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium llatzerense.;"
acyl-CoA dehydrogenase domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_190_92
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(89962..91983)
DNA (2022bp) protein (674aa)
Carbamoyl-phosphate synthase L chain, ATP-binding protein n=1 Tax=Mycobacterium gilvum (strain PYR-GCK) RepID=A4TFJ0_MYCGI rbh
Mycobacterium llatzerense strain CLUC14 Mllat_contig000007, whole genome shotgun sequence {ECO:0000313|EMBL:KIU17612.1}; TaxID=280871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium llatzerense.;"
carbamoyl-phosphate synthase subunit L rbh
SCNpilot_cont_500_bf_scaffold_190_93
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(91983..93584)
DNA (1602bp) protein (534aa)
Carboxyl transferase n=1 Tax=Mycobacterium gilvum (strain PYR-GCK) RepID=A4TFI9_MYCGI rbh
Mycobacterium llatzerense strain CLUC14 Mllat_contig000007, whole genome shotgun sequence {ECO:0000313|EMBL:KIU17613.1}; TaxID=280871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium llatzerense.;"
carboxyl transferase rbh
SCNpilot_cont_500_bf_scaffold_190_94
Mycobacterium gilvum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

93718..94896
DNA (1179bp) protein (393aa)
acyl-CoA dehydrogenase domain-containing protein; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] rbh
Acyl-CoA dehydrogenase domain protein n=1 Tax=Mycobacterium gilvum (strain PYR-GCK) RepID=A4TFI8_MYCGI rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABP47080.1}; TaxID=350054 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens; (strain ATCC 700033 / PYR-GCK)).;"
SCNpilot_cont_500_bf_scaffold_190_95
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

94932..95735
DNA (804bp) protein (268aa)
enoyl-CoA hydratase (EC:4.2.1.17) rbh
enoyl-CoA hydratase n=1 Tax=Herbaspirillum lusitanum RepID=UPI0002E02CD0 rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:CQD23922.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;"
SCNpilot_cont_500_bf_scaffold_190_96
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(95823..97424)
DNA (1602bp) protein (534aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X752_9PSEU rbh
Acyl-CoA synthetase {ECO:0000313|EMBL:CQD23902.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;"
AMP-dependent synthetase and ligase rbh
SCNpilot_cont_500_bf_scaffold_190_97
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(97457..97882)
DNA (426bp) protein (142aa)
Putative nucleic-acid-binding protein containing a Zn-ribbon n=1 Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BT38_MYCCN
Putative nucleic-acid-binding protein containing a Zn-ribbon {ECO:0000313|EMBL:CQD24372.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;"
putative nucleic-acid-binding protein containing a Zn-ribbon
SCNpilot_cont_500_bf_scaffold_190_98
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(97917..99083)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=4 Tax=Mycobacterium RepID=A1UI13_MYCSK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KBZ60456.1}; TaxID=1324261 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis TKK-01-0051.;"
SCNpilot_cont_500_bf_scaffold_190_99
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

99162..99716
DNA (555bp) protein (185aa)
Uncharacterized protein, possibly involved in aromatic compounds catabolism n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X738_9PSEU
Uncharacterized protein, possibly involved in aromatic compounds catabolism {ECO:0000313|EMBL:EHR53506.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
aromatic compounds degradation protein paaI
SCNpilot_cont_500_bf_scaffold_190_100
Gordonia hirsuta, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(99709..101283)
DNA (1575bp) protein (525aa)
Putative fatty-acid--CoA ligase n=1 Tax=Gordonia hirsuta DSM 44140 = NBRC 16056 RepID=L7LCF4_9ACTO rbh
Putative fatty-acid--CoA ligase {ECO:0000313|EMBL:GAC58579.1}; TaxID=1121927 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia hirsuta DSM 44140 = NBRC 16056.;"
putative long-chain-fatty-acid CoA ligase
SCNpilot_cont_500_bf_scaffold_190_101
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

101532..102791
DNA (1260bp) protein (420aa)
Beta-lactamase domain protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y6U6_THEBD rbh
Beta-lactamase {ECO:0000313|EMBL:ETK31942.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
beta-lactamase domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_190_102
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

102745..103527
DNA (783bp) protein (261aa)
Short chain dehydrogenase/reductase oxidoreductase n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0RNB8_MYCXE
Putative short-chain dehydrogenase/reductase {ECO:0000313|EMBL:CQD23900.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;"
short chain dehydrogenase/reductase oxidoreductase
SCNpilot_cont_500_bf_scaffold_190_103
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

103630..104610
DNA (981bp) protein (327aa)
Fe(3+)-transporting ATPase {ECO:0000313|EMBL:AEA27583.1}; EC=3.6.3.30 {ECO:0000313|EMBL:AEA27583.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Fe(3+)-transporting ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXK0_PSEUX
Fe(3+)-transporting ATPase; K02065 putative ABC transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_190_104
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(104634..105233)
DNA (600bp) protein (200aa)
TetR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDE5E
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACY98023.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
SCNpilot_cont_500_bf_scaffold_190_105
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

105335..106813
DNA (1479bp) protein (493aa)
cytochrome P450 n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDE58 rbh
Cytochrome P450 {ECO:0000313|EMBL:EHR52732.1}; Flags: Precursor;; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
cytochrome P450 rbh
SCNpilot_cont_500_bf_scaffold_190_106
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

106810..108045
DNA (1236bp) protein (412aa)
Cytochrome P450 n=1 Tax=Nocardioides sp. CF8 RepID=R7XY61_9ACTO rbh
Cytochrome P450 {ECO:0000313|EMBL:EON24287.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Cytochrome P450 rbh
SCNpilot_cont_500_bf_scaffold_190_107
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

108096..109241
DNA (1146bp) protein (382aa)
fadE19; acyl-CoA dehydrogenase; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] rbh
Acyl-CoA dehydrogenase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X824_9PSEU rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EHR53556.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
SCNpilot_cont_500_bf_scaffold_190_108
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(109267..110109)
DNA (843bp) protein (281aa)
MerR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDE54
MerR family transcription regulator {ECO:0000313|EMBL:AHH96551.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
MerR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_190_109
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(110106..110492)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDE56
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ56363.1}; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
SCNpilot_cont_500_bf_scaffold_190_110
unknown

Not on your lists

comp(110483..111097)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDE55
SCNpilot_cont_500_bf_scaffold_190_111
unknown

Not on your lists

111705..111884
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_190_112
unknown

Not on your lists

111990..112241
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_190_113
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(112250..112921)
DNA (672bp) protein (224aa)
amino acid ABC transporter ATPase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE7A4
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB50049.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_cont_500_bf_scaffold_190_114
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

113427..113876
DNA (450bp) protein (150aa)
universal stress protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDB1E
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AEA25580.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_190_115
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

114022..115521
DNA (1500bp) protein (500aa)
aldehyde dehydrogenase (EC:1.2.1.3) rbh
NAD-dependent aldehyde dehydrogenase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X800_9PSEU rbh
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:EHR53532.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
SCNpilot_cont_500_bf_scaffold_190_116
Mycobacterium yongonense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

115568..115978
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Mycobacterium yongonense 05-1390 RepID=M1FUQ7_9MYCO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV14805.1}; TaxID=1138871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium yongonense 05-1390.;"
SCNpilot_cont_500_bf_scaffold_190_117
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

116008..117642
DNA (1635bp) protein (545aa)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] rbh
O-succinylbenzoate--CoA ligase n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AXE4_FRADG rbh
Mycobacterium llatzerense strain CLUC14 Mllat_contig000007, whole genome shotgun sequence {ECO:0000313|EMBL:KIU17634.1}; TaxID=280871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium llatzerense.;"
SCNpilot_cont_500_bf_scaffold_190_118
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

117752..118861
DNA (1110bp) protein (370aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
Parvulin-like peptidyl-prolyl isomerase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X809_9PSEU
SCNpilot_cont_500_bf_scaffold_190_119
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(118874..120178)
DNA (1305bp) protein (435aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
histidine kinase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDD87
histidine kinase
SCNpilot_cont_500_bf_scaffold_190_120
Mycobacterium gilvum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

120346..121452
DNA (1107bp) protein (369aa)
alcohol dehydrogenase; K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] rbh
Alcohol dehydrogenase GroES domain protein n=1 Tax=Mycobacterium gilvum (strain PYR-GCK) RepID=A4TFL6_MYCGI rbh
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ABP47056.1}; TaxID=350054 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens; (strain ATCC 700033 / PYR-GCK)).;"
Displaying items 91-120 of 136 in total

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