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SCNpilot_cont_500_bf_scaffold_735

Search features with annotation key words

Displaying items 31-60 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_735_31
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29411..30007
DNA (597bp) protein (199aa)
Major facilitator superfamily MFS_1 n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EY38_MODMB
Major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CCH88301.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
SCNpilot_cont_500_bf_scaffold_735_32
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30048..30317
DNA (270bp) protein (90aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJ97_PSEUX
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA24336.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_735_33
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30385..31683
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036B8C24 rbh
Signal peptide protein {ECO:0000313|EMBL:EWM12753.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_735_34
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31680..32903
DNA (1224bp) protein (408aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0FSP1_AMYMS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEK42129.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCNpilot_cont_500_bf_scaffold_735_35
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(32900..34585)
DNA (1686bp) protein (562aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EHN10629.1}; EC=6.2.1.3 {ECO:0000313|EMBL:EHN10629.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00035E24F7 rbh
acyl-CoA ligase rbh
SCNpilot_cont_500_bf_scaffold_735_36
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34653..35318
DNA (666bp) protein (222aa)
TetR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE49C
TetR family transcriptional regulator {ECO:0000313|EMBL:GAM48761.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_735_37
Streptomyces sp. NRRL B-1568, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35449..36396
DNA (948bp) protein (316aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1609106 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL B-1568.;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Streptomyces aurantiacus JA 4570 RepID=S3ZS62_9ACTO rbh
3-oxoacyl-(acyl carrier protein) synthase III rbh
SCNpilot_cont_500_bf_scaffold_735_38
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36397..36612)
DNA (216bp) protein (72aa)
gabT; 4-aminobutyrate aminotransferase (EC:2.6.1.19); K07250 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22]
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003772F55
4-aminobutyrate transaminase {ECO:0000313|EMBL:ERK61397.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_500_bf_scaffold_735_39
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36859..37602)
DNA (744bp) protein (248aa)
Putative HxlR family transcriptional regulator n=1 Tax=Rhodococcus erythropolis (strain PR4 / NBRC 100887) RepID=C0ZWC2_RHOE4
HxlR family transcriptional regulator {ECO:0000313|EMBL:ETK31622.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
HxlR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_735_40

Not on your lists

37762..38835
DNA (1074bp) protein (358aa)
Methyltransferase type 12 n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RYM5_HALTV
Uncharacterized protein {ECO:0000313|EMBL:KKK82426.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
methyltransferase type 12
SCNpilot_cont_500_bf_scaffold_735_41
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38807..39541)
DNA (735bp) protein (245aa)
Translation initiation factor IF-2 n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q1L6_KRIFD
translation initiation factor IF-2; K02519 translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_500_bf_scaffold_735_42
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39593..40342)
DNA (750bp) protein (250aa)
amidohydrolase n=1 Tax=Streptomyces scabrisporus RepID=UPI0003622A5F
Amidohydrolase {ECO:0000313|EMBL:KDN20131.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
amidohydrolase rbh
SCNpilot_cont_500_bf_scaffold_735_43
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40339..41235)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00035E0BB1 rbh
fadB; 3-hydroxyacyl-CoA dehydrogenase rbh
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AEK41812.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCNpilot_cont_500_bf_scaffold_735_44
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41232..43124)
DNA (1893bp) protein (631aa)
Acetoacetyl-CoA synthetase {ECO:0000313|EMBL:KDN20133.1}; EC=6.2.1.16 {ECO:0000313|EMBL:KDN20133.1};; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
acetoacetyl-CoA synthetase (EC:6.2.1.16); K01907 acetoacetyl-CoA synthetase [EC:6.2.1.16] rbh
Acetoacetyl-CoA synthetase n=3 Tax=Amycolatopsis mediterranei RepID=D8I4B6_AMYMU rbh
SCNpilot_cont_500_bf_scaffold_735_45
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43121..43897)
DNA (777bp) protein (259aa)
enoyl-CoA hydratase (EC:4.2.1.17) rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:AEK41814.1}; EC=4.2.1.17 {ECO:0000313|EMBL:AEK41814.1};; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00036E469E rbh
SCNpilot_cont_500_bf_scaffold_735_46
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43894..45372)
DNA (1479bp) protein (493aa)
Fatty-acyl-CoA synthase n=3 Tax=Amycolatopsis mediterranei RepID=D8I4B8_AMYMU rbh
fatty-acyl-CoA synthase rbh
Fatty-acyl-CoA synthase {ECO:0000313|EMBL:AEK41815.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCNpilot_cont_500_bf_scaffold_735_47
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45431..45850
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00036368C9
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EWM10040.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
MarR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_735_48
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45940..46551
DNA (612bp) protein (204aa)
Integral membrane protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRP1_PSEUX
hypothetical protein
Integral membrane protein {ECO:0000313|EMBL:AEA27258.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_735_49
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47229..48104)
DNA (876bp) protein (292aa)
glycoside hydrolase family protein, partial n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF052
Glycoside hydrolase family 16 {ECO:0000313|EMBL:EHB58561.1}; Flags: Precursor;; TaxID=931627 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;"
glycoside hydrolase protein
SCNpilot_cont_500_bf_scaffold_735_50
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48186..49346
DNA (1161bp) protein (387aa)
Phospholipase/Carboxylesterase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1R8_PSEUX rbh
phospholipase/carboxylesterase rbh
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:AEA27978.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_735_51
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

49365..51317
DNA (1953bp) protein (651aa)
Probable potassium transport system protein kup n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1S5_PSEUX rbh
Low affinity potassium transport system protein kup; K03549 KUP system potassium uptake protein rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_735_52
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

51356..52063
DNA (708bp) protein (236aa)
GntR family transcriptional regulator n=1 Tax=Actinoplanes globisporus RepID=UPI00038257CB rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EQD82244.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
GntR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_735_53
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52040..52792)
DNA (753bp) protein (251aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1KS64_9ACTO rbh
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EKX63646.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
oxidoreductase rbh
SCNpilot_cont_500_bf_scaffold_735_54
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52789..54099)
DNA (1311bp) protein (437aa)
fuconate dehydratase n=1 Tax=Actinoalloteichus spitiensis RepID=UPI0003780798 rbh
mandelate racemase/muconate lactonizing protein rbh
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ADB34188.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_500_bf_scaffold_735_55
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54200..54715)
DNA (516bp) protein (172aa)
msrA; peptide methionine sulfoxide reductase MsrA (EC:1.8.4.11) rbh
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401, ECO:0000313|EMBL:CCH87430.1};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EVL7_MODMB rbh
SCNpilot_cont_500_bf_scaffold_735_56
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54791..55630)
DNA (840bp) protein (280aa)
CBS domain containing protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLB4_PSEUX
CBS domain-containing protein
CBS domain containing protein {ECO:0000313|EMBL:AEA25956.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_735_57
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(55665..56423)
DNA (759bp) protein (253aa)
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X737_9PSEU
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:EHR53505.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
enoyl-CoA hydratase/carnithine racemase
SCNpilot_cont_500_bf_scaffold_735_58
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

56560..56961
DNA (402bp) protein (134aa)
glyoxalase n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000370F90A
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:KID27891.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_735_59
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

57042..59153
DNA (2112bp) protein (704aa)
glycogen debranching protein GlgX; K02438 glycogen operon protein GlgX [EC:3.2.1.-] rbh
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Glycogen debranching enzyme GlgX n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D004_PSEUX rbh
SCNpilot_cont_500_bf_scaffold_735_60
unknown

Not on your lists

comp(59131..59367)
DNA (237bp) protein (79aa)

This feature has no annotations

Displaying items 31-60 of 68 in total

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