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SCNpilot_cont_500_bf_scaffold_368_15

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(12603..13520)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XXG9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 305.0
  • Bit_score: 175
  • Evalue 8.80e-41
Type II secretion system protein {ECO:0000313|EMBL:EON23690.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.3
  • Coverage: 305.0
  • Bit_score: 175
  • Evalue 1.20e-40
Type II secretion system F domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 300.0
  • Bit_score: 174
  • Evalue 6.20e-41

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Taxonomy

Nocardioides sp. CF8 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGGCGCTGACACTTCCCGCTATCGCCGCGGCGGCCGCTGGTGCTCTCTGTGTCGCGGGGCTGCTTCTCGTCATCACGAGTTTCGTCGGTGCTGGGGCAGGTCGTTCGGAGGACCCCGGCCGAACGTCGGGTCGGTGGTGGCGGCGGGTGAGTGCCGCGGTGGATGCCGCGCGCTCCCCTGCGCTACCGGGCGGCCACCAGCGCCTTCGGGTCGCCGGATGGCTGCTCGCAGGGACGGCGATCTGGCTGGCCACGGACTGGCTCGCGACGGGGATCGCCGTTGCGGTGGTAGGGATCTGGCTTCCGTGGCTCCTCGGCTCGGCCCGTGCGGCGCAGGAGCGCATCGACCGGGTCGAGGCACTCGCCACCTGGTGCAGGCGGATGGCCGACACCCTCGTCGGCGGTGGTGCGATCGGCCTCGCCCAGGCCATCACCCTCACCGCTGAGCACGCGCCCGACGAGATCAGCGAACCGGTCCAGCGCCTCGCGCAACGACTCCGAGCCGGTTACGACGACCGCATCGGCGCGGTGCAGGCATTCGCCGACGACATCGACGACCGTATCGGCGACACCGTCGCGGCTGCGCTGGCGTTGGCTCTGCACCAGCAGAGTGTCGGCGTCGCGGCGGTGCTGCGTCAGCTGGCGACCGGGATATCCCGTGACGTCCGGGCCCGGCGCAACATCGAGGCCGAACGTGCCGAGTCGCGTCAGTCGATCAGGATGCTGCTGCTGATCCAAGCCGCCGTGCTCACCCTGCTCCTGTTCGTCCCGGGCTTCGCTGCCCCCTATCGCAGCCTGGTCGGGCAGCTGGTGATGGCCGCGTTGCTCGCCGGGACGGTCGGGCTACTGGTGTGGATGCGTCGCTTGGCGCTGGGCCGGCGTGCGCCTCGATCCCTCGAGAAATCTGGTGGACCATGA
PROTEIN sequence
Length: 306
MALTLPAIAAAAAGALCVAGLLLVITSFVGAGAGRSEDPGRTSGRWWRRVSAAVDAARSPALPGGHQRLRVAGWLLAGTAIWLATDWLATGIAVAVVGIWLPWLLGSARAAQERIDRVEALATWCRRMADTLVGGGAIGLAQAITLTAEHAPDEISEPVQRLAQRLRAGYDDRIGAVQAFADDIDDRIGDTVAAALALALHQQSVGVAAVLRQLATGISRDVRARRNIEAERAESRQSIRMLLLIQAAVLTLLLFVPGFAAPYRSLVGQLVMAALLAGTVGLLVWMRRLALGRRAPRSLEKSGGP*