ggKbase home page

SCNpilot_cont_500_bf_scaffold_575_5

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(3226..4017)

Top 3 Functional Annotations

Value Algorithm Source
ABC-2 type transporter n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYF1_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 257.0
  • Bit_score: 347
  • Evalue 1.10e-92
  • rbh
ABC transporter; K09686 antibiotic transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 257.0
  • Bit_score: 347
  • Evalue 3.50e-93
  • rbh
ABC-2 type transporter {ECO:0000313|EMBL:AEA25591.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 257.0
  • Bit_score: 347
  • Evalue 1.60e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 792
GTGACCTCCGATCATGGGACGCGGTTCGACCCCGGCACCTTCACCCCGGACGCCGGCGCCGGGCGGCCGTTGCGGATGCTCGCGGCCCAGTCGGGCGTCGAGATGCGGCTGGCGCTGCGCAACGGCGAGCAGGTGCTGCTCACGCTGCTGATCCCGGTGGTGCTGCTCGTCGGGCTCACGCTGCTGGGCATCGTGCCGCTGCCCGAACCCCGGGTCGCGACGGTGGCGCCGGGGGTGCTCGCCCTGGCTGTGATGTCCACGGCGTTCACCGGGCAGGCCATCGCACTGGGCTTCGACCGCCGCTACGGCGTGATCCGGCGGCTGGCCGCCACCGCGCTGCCCCGCTGGCTGCTCGTGGCGGGCCGGCTCGTCGCGATGCTCGGTGTGGTCGTCGTGCAGATGGTGATCCTCGTCGCGATCGCGGTCGCGCTGGGCTGGCGGCCCGCCGCGGCCGGCATCGGGTGGGCCGTGCTGCTGGTGCTGCTGGGCGTCGCGGCGTTCGGGTCGCTGGGGATCCTCGTGGGCGGCACGCTGCGCGCGGAGGTCACCCTCGCCGTCGCCAACCTGGTGTGGTTCGTGCTGCTGCTGGCCGGGGGCATCGTGATCCCGGTGGGTCAGCTGCCCGGCGCGATCGGGGCCGTGGCGCAGTACCTGCCCAGCGGTGCGCTGGCCGAGGGCCTGCGCACGGCGCTGGCCACAGGTACGGGGCCGGGTCTCACGCCGGTGCTCGTGCTCGTCGGGTGGACGGTGGTGGCGGGCGGCATCGCCGTCCGGGCGGTCCGCCTCCGCTAG
PROTEIN sequence
Length: 264
VTSDHGTRFDPGTFTPDAGAGRPLRMLAAQSGVEMRLALRNGEQVLLTLLIPVVLLVGLTLLGIVPLPEPRVATVAPGVLALAVMSTAFTGQAIALGFDRRYGVIRRLAATALPRWLLVAGRLVAMLGVVVVQMVILVAIAVALGWRPAAAGIGWAVLLVLLGVAAFGSLGILVGGTLRAEVTLAVANLVWFVLLLAGGIVIPVGQLPGAIGAVAQYLPSGALAEGLRTALATGTGPGLTPVLVLVGWTVVAGGIAVRAVRLR*