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SCNpilot_cont_500_bf_scaffold_575_24

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 22645..24504

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF340 similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 619.0
  • Bit_score: 890
  • Evalue 8.30e-256
  • rbh
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:EWC61026.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 613.0
  • Bit_score: 840
  • Evalue 1.40e-240
ABC-type transporter similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 611.0
  • Bit_score: 832
  • Evalue 6.50e-239

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Taxonomy

Actinokineospora spheciospongiae → Actinokineospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1860
ATGTTGCGCGGGGTGGAGCGCGGGGCCACCGCCCCGCGGTCGGTGAAGAAGGGCACGATCCCGCGCATCTGGCGGTTCGCGGCCTCCTACCGGAACTGGCTGATCGCGTTCCTGCTGCTCACGGTGCTCTCCGCGGTGGTCGGGGTGGCCACGCCGGTGGTCGCGGGCCGGGTGGTGGACACCATCGTCAAGGGCGGCGGCACCTCCGCCGCCGCCGCGACCGTGGTGGGGCTGGCCGCCGGCATCGCCGCCCTGGCGATCATCGAGGCGTGCAACGGGCTGCTCACCCGCTGGTACTCGTCCCGGTTGGGCGAGGGGCTGATCGCCGATCTGCGCCGCGCGGTGTTCGGGCACGTGCAGACGATGCCGGTGGCGTTCTTCACCCGCACCCGCACCGGTGCGCTCGTCAGCCGCCTCAACAACGACGTGATCGGGGCCCAGTCGGCGATCACCACCACCCTGGCCAGCGTGGTCAGCAACGTCATCCAGCTGACCCTCGCCGTCGCGGTGATGCTGACGCTGGCCTGGCAGGTCACGCTGCTGGCCCTGGTGCTGCTGCCGATCTTCGTGATTCCGGCCCGCCGGATGGGCGTGCCGATCGCCGACCTGCGTCGCGAGGCCGCGGACCTCAACGCCGGCATCTCCAACCAGATGACCGAGCGGTTCTCCGCGCCGGGCGCCACGCTCGTCAAGCTGTTCGGCGACCCGGACGCCGAGCTGGCGGAGTTCGGCGAGCGCACCCTCCGGATCCGCGACATCGGGGTGCGTACCGCGATGGTCTCGCGCGTGTTCGTCACGGCGCTGTCGCTGGTCTCCGCGCTCGCCCAGGCCCTGATCTACGGGCTCGGTGGCTACCTGGCCGTCACCGGGCAGATCGAGGCGGGCACGGTCGTCACGCTCGCGCTGCTGCTCACCCGGCTCTACACGCCGATGACCGCGCTGGCCAACGCCCGCGTCGACGTCATGACGGCGCTGGTGTCGTTCGAGCGGGTCTTCGAGGTGCTCGACCTGAAGCCGATGATCACCGAGAAGCCGGACGCCCGCACGCTGCCCGACGGCCCGGTGTCGGTCCGCCTGCGCGACGTGCGCTTCGCCTACCCCAACGCCGAGGACGTCTCGCTCGCCTCGCTGGAGGAGGTGGCGGTGCTCGACCAGCGGCACAACGAGGAGGTGCTGCACGGCGTCGACCTCGAGGTGGGGGCCGGGCGGCTGCTGGCACTGGTCGGGTCGTCGGGGGCGGGGAAGTCGACCATCGCGTCGCTCGTGCCGCGCCTCTACGACGTCGACGGCGGCGCGGTGGAGCTCTCCGGCATCGACGTGCGCGACCTGACCTTCGCCTCCGTGCGGGGCGCCGTCGGCGTCGTCACGCAGGACGGGCACCTGTTCCACGACACGATCGGCGGCAACCTGCGCTACGCCGCCCCCGGCGCCTCGGACGCCGAGATCGTCGAGGCGCTGCAGCGGGCCCGGCTCGGCGAGCTGCTCGACGCCCTGCCCGACGGGCTCGACACGGTGGTGGGGGAGCGCGGCTACCGGCTCTCCGGCGGCGAGCGCCAGCGCCTGACGATCGCCCGGCTGCTGCTCGCGAAGCCCCGCGTCGTCATCCTGGACGAGGCCACCGCGCACCTGGACTCCGAGTCCGAGGCCGCGGTCCAGGAGGCGCTCGTGGAGGCGCTGGCGGGGCGGACGGCCATCGTGATCGCGCACCGGCTCTCGACGATCCGCGCGGCCGACCAGATCGCGGTCGTGGAGCACGGTCGGATCGTGGAGCGGGGCACCCACGACGAGCTGCTCGCCACGGGCGGGCGCTACGCGGTGCTGCACCGCACGCAGTTCGCCGGCCAGCATCTGGTCGGATGA
PROTEIN sequence
Length: 620
MLRGVERGATAPRSVKKGTIPRIWRFAASYRNWLIAFLLLTVLSAVVGVATPVVAGRVVDTIVKGGGTSAAAATVVGLAAGIAALAIIEACNGLLTRWYSSRLGEGLIADLRRAVFGHVQTMPVAFFTRTRTGALVSRLNNDVIGAQSAITTTLASVVSNVIQLTLAVAVMLTLAWQVTLLALVLLPIFVIPARRMGVPIADLRREAADLNAGISNQMTERFSAPGATLVKLFGDPDAELAEFGERTLRIRDIGVRTAMVSRVFVTALSLVSALAQALIYGLGGYLAVTGQIEAGTVVTLALLLTRLYTPMTALANARVDVMTALVSFERVFEVLDLKPMITEKPDARTLPDGPVSVRLRDVRFAYPNAEDVSLASLEEVAVLDQRHNEEVLHGVDLEVGAGRLLALVGSSGAGKSTIASLVPRLYDVDGGAVELSGIDVRDLTFASVRGAVGVVTQDGHLFHDTIGGNLRYAAPGASDAEIVEALQRARLGELLDALPDGLDTVVGERGYRLSGGERQRLTIARLLLAKPRVVILDEATAHLDSESEAAVQEALVEALAGRTAIVIAHRLSTIRAADQIAVVEHGRIVERGTHDELLATGGRYAVLHRTQFAGQHLVG*