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SCNpilot_cont_500_bf_scaffold_746_34

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(31305..32423)

Top 3 Functional Annotations

Value Algorithm Source
Geranyltranstransferase; K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 370.0
  • Bit_score: 466
  • Evalue 9.60e-129
  • rbh
Geranyltranstransferase {ECO:0000313|EMBL:AEA24984.1}; EC=2.5.1.10 {ECO:0000313|EMBL:AEA24984.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 370.0
  • Bit_score: 466
  • Evalue 4.30e-128
geranylgeranyl pyrophosphate synthase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE2FF similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 362.0
  • Bit_score: 482
  • Evalue 5.40e-133
  • rbh

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1119
GTGACCCGCACCGTAGGCACCGACGGACCACCCGCCAGCGCCACCGACGGGGGCCTGACGACCGGCATCGAGGCAGCCCTGTCGGTCTACCTGGAGGGCCGCCTCGCCGACACGTCCGCGATCGATCCCGCGTTCGGCCGGGCCACCGAGTCGCTGGCCGACTTCGTGCTCAGCGGGGGCAAGCGGCTGCGCCCCACGTTCGCCTGGTGGGGGTGGCGGGGTGCGGGCGGCGCCACGGACGCGCCGGAGGCGGTGGCCGTGCTGCGCGCCGTCAGCGCGCTGGAGCTGCTGCAGGGCGCGGCCCTGATCCACGACGACCTGATGGACGCCTCGGCCACCCGGCGCGGGCGTCCCACCGTGCACGTCGCGTTCGCGCGTCGGCACGCCGACGCCGGCTGGCAGGGCAGGCCCGCGCGCTTCGGCGCGGCGGCGGCGATCCTGCTCGGCGACCTCGCGCTGGTGTGGGCCGACGACATGTTCCGCGGTTCCGGGCTGCCGCACACGGCGCTGGACCGCACCGCCGAGCCGTGGCAGGCGATGCGCACCGAGCTGCTGGGCGGCCAGTTCCTCGACGTGCTCAACCAGTCCACCGGCGACACCTCCACCCGCGCCGCCCTGCAGGTGGACCGCTACAAGACCGCCGCCTACACCGTCGAGCGCCCGCTGCACCTGGGCGCGGCCATCGCCGGCGCCGGGTCCGACGTGATCGCGGCATACCGCCGGTTCGGGGCCGACATCGGCGTGGCGTTCCAGCTGCGCGACGACCTGCTGGGTGTCTTCGGTGACCCCGAGGTCACCGGCAAGCCGGCGGGCGACGACCTGCGGGAGGGCAAGCGCACCGTGCTCATCGCCACGGCCGTCGAGCGCGCCGAGCAGCGCGGCGACACCGCCGCCCGCGACGCCGTGCTCGCCGCCGTCGGTGACCCCGATCTCGACGCCGACGGCCTCGAGGCCGTGCGCGGGTTGCTCACGGAGCTGGGTGCCGTGCAGGCCGTGGAGCAGCGGATCGCGTCGCTCACCGGGTCGGCGCTGGACGCGCTCGGCACGGCCGACATCGCCGAGCCCGCCGCCGCCCGGCTCGCCGACCTGGCCGTCACGGCCACCCGCCGGCACCGATGA
PROTEIN sequence
Length: 373
VTRTVGTDGPPASATDGGLTTGIEAALSVYLEGRLADTSAIDPAFGRATESLADFVLSGGKRLRPTFAWWGWRGAGGATDAPEAVAVLRAVSALELLQGAALIHDDLMDASATRRGRPTVHVAFARRHADAGWQGRPARFGAAAAILLGDLALVWADDMFRGSGLPHTALDRTAEPWQAMRTELLGGQFLDVLNQSTGDTSTRAALQVDRYKTAAYTVERPLHLGAAIAGAGSDVIAAYRRFGADIGVAFQLRDDLLGVFGDPEVTGKPAGDDLREGKRTVLIATAVERAEQRGDTAARDAVLAAVGDPDLDADGLEAVRGLLTELGAVQAVEQRIASLTGSALDALGTADIAEPAAARLADLAVTATRRHR*