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SCNpilot_cont_500_bf_scaffold_746_80

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(82528..83394)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Frankia sp. EUN1f RepID=D3DCU3_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 285.0
  • Bit_score: 176
  • Evalue 2.90e-41
Helix-turn-helix domain protein {ECO:0000313|EMBL:EFC79263.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.7
  • Coverage: 285.0
  • Bit_score: 176
  • Evalue 4.00e-41
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 289.0
  • Bit_score: 170
  • Evalue 6.40e-40

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Taxonomy

Frankia sp. EUN1f → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGGAGACCACGAGCACGGGGCCGCTGATCCCCCGTCGACTCCTGGGCGCCGCCTTCCGTGAGCTGCGGGAATCCCGCGGAGAGACGCTGCAGCAGGCCGCCCAGGCGTGCCTCTTCTCCCCGTCCAAGCTGAGCCGGATCGAGAACGGACTGGCGGGCGAGCCGAACCCCCGCGACGTGCGCGACCTCGTCGCCCACTTCGGAGTGGACGCCGACCGTGTCGCCGAGCTGGAGGCGCTCGCCCAGGCCGGGCGCGTCCCGGGGTGGTGGCAGGTCCCGCCCTACGACATGCCCTCTCGGGTGGACACGTTCATCTCCTACGAGAGCACGGCCTCACGCATCCAGGTGTACGAGCCCGCCGTGATCCCCGGGCTGCTCCAGACACGGGACTATGCCGAGGCCGCTCTGACCCACCTTGCGCCATGGCTTGACGCCGACGCGGTAGCACTCCAGGTCGACATCCGCATGCGACGCCAGTCCGAGCACCGGCTGCGTAGCCCCCGACCCAGCACGCTCAACGTCCTGTCCGAGGCGGTGCTGCGCCGCGGTGCCGGACACCCGGCCCTCATGCGCGACCAACTCGACGCGCTGATAGAGGCGAGCACAGACCCCCTCACCGAGTTGCACGTCCTCCCGTTCAGCGCCGGCCTGCACCATGCGGTCCAGCTGAGCACCACCACCGTCTTCAGCTTCGACAACGCCGACGATCTCGACGTGGTCGCCATCGAACGGGACAGATCCGTCCAGTTCCTCGAGAAGTCCGACAACGTGCGTCACTACCGCGACGTGATCGCTGGGCTCGCGACGTACTGGCTCGACGAAGCCGGTAGCCGCTCCTTCATCGCCGACATTCGCTCCACCATCTGA
PROTEIN sequence
Length: 289
METTSTGPLIPRRLLGAAFRELRESRGETLQQAAQACLFSPSKLSRIENGLAGEPNPRDVRDLVAHFGVDADRVAELEALAQAGRVPGWWQVPPYDMPSRVDTFISYESTASRIQVYEPAVIPGLLQTRDYAEAALTHLAPWLDADAVALQVDIRMRRQSEHRLRSPRPSTLNVLSEAVLRRGAGHPALMRDQLDALIEASTDPLTELHVLPFSAGLHHAVQLSTTTVFSFDNADDLDVVAIERDRSVQFLEKSDNVRHYRDVIAGLATYWLDEAGSRSFIADIRSTI*