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SCNpilot_cont_500_bf_scaffold_746_103

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(102732..104054)

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily transporter, TetB family n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LE90_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 435.0
  • Bit_score: 439
  • Evalue 3.60e-120
  • rbh
MFS transporter {ECO:0000313|EMBL:AKC78985.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 439.0
  • Bit_score: 440
  • Evalue 3.90e-120
MFS transporter similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 439.0
  • Bit_score: 429
  • Evalue 1.20e-117
  • rbh

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Taxonomy

Xanthomonas campestris → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1323
ATGACGACGGTGCTCGACGGCAGGATGCGTGCCCTCACGGCGGGCTCGGTGGCGCTCGTGTCGCTGGCGGCGTTCGAGGCCGTGGCCGTGGCCACCGCGATGCCGACCGTGGCCGTGGCGCTGGACGGCCTCTCCGGCTACGCGCTCGCGTTCGGCCTCCCGCTGGCGACGAGCGTGCTGGGGATGGTCGTCGCGGGCGCGTGGAGCGACGCGCGGGGGCCGGCGTGGCCGATGCGGGTGGGCGTCGGGCTGTTCGTGACGGCGCTGCTCGTGGCGGGGCTCGCGCCGTCGATGACGGTGTTCACGGCGGGGCGCGCGCTGCAGGGGCTCGGGTCCGGGCTGTTCTCCGTGGCGCTCTACGTGGTGGTCGGGCGGCTCGTGCCGCCGGAGCGGCGGCCCCGCCTGTTCGCCGCGTTCGCCGCCGCCTGGGTGCTGCCGGCGGTGGTGGGGCCGCCGGTGGCGGGGTTGCTGGTGACGACCGTGGGCTGGCGGTGGGTGTTCCTGCTGGCCGCGGGGCTCGCGGTGCCGGCCACGCTGCTGGTGGAACCCGCCCTGCGGGGGTTGCGGGCCGAGGCGGCGCCCTGGTCGGGGAAGCGGGTGCCGTGGGCGGTCGGGGCGGCGGTCGGCGCGGTAGGGCTGCAGGAGGCCGGGCACCTGCCGGCCGGGGCCGGGGTAGTGGTCGCGGTGATCGCCGCGGCCGTCGTCGGGGTCTCGGTCGTGCGGTTGCTGCCCGTCGGCACGGTGCGGGCCCGCGCCGGCCTGCCCGCGGTGGTGGCGCTGCGCGGGCTGGCGTCGGCGGCGTTCGTGGCGGGTGAGGCGTTCCTGCCGCTGCTGCTCTCCCGCGAACGGGGGCTGCCGCCCGCCCTGGCCGGCCTGATCCTCACCGTGGCCGCGCTGACCTGGGCCACGGGCTCGTGGGTGCAGGGCCGCGACGCCGCTCCCGCGCGTCCGACGCTGCTGCGGGCCGGCACGACGTCGATCGCGCTCGGCATCCTGGGCGCGACGTCGCTGCTGGTCCCGGCGGTGCCGCTGGCCGTCGGGGTGGCGGGGTGGGCGCTCGTCGGGCTGGGCATGGGCATGACCTACCCGACCCTGTCGGTGCTCACGCTGGAGCTCTCGGCGCCGTCGGAGCAGGGGACGAACACGTCCGCGCTGCAGATCTCCGACGCCCTGTTCGGGGCCGTGGTGCTGGCGCTGTCGGGGGTGCTGTTCGCCGCGCTCGTGGACGCCGGCCCGGTGGCCTACCTGGCGGGGTTCGCCGTGGCCGCGGTCCCGGCCGCCGTCGCGGTGGTGGTGGCGGGCCGGGCCACGCGTCGCACCTGA
PROTEIN sequence
Length: 441
MTTVLDGRMRALTAGSVALVSLAAFEAVAVATAMPTVAVALDGLSGYALAFGLPLATSVLGMVVAGAWSDARGPAWPMRVGVGLFVTALLVAGLAPSMTVFTAGRALQGLGSGLFSVALYVVVGRLVPPERRPRLFAAFAAAWVLPAVVGPPVAGLLVTTVGWRWVFLLAAGLAVPATLLVEPALRGLRAEAAPWSGKRVPWAVGAAVGAVGLQEAGHLPAGAGVVVAVIAAAVVGVSVVRLLPVGTVRARAGLPAVVALRGLASAAFVAGEAFLPLLLSRERGLPPALAGLILTVAALTWATGSWVQGRDAAPARPTLLRAGTTSIALGILGATSLLVPAVPLAVGVAGWALVGLGMGMTYPTLSVLTLELSAPSEQGTNTSALQISDALFGAVVLALSGVLFAALVDAGPVAYLAGFAVAAVPAAVAVVVAGRATRRT*