ggKbase home page

SCNpilot_cont_500_bf_scaffold_746_105

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(104742..105443)

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase/reductase SDR n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE8A2 similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 236.0
  • Bit_score: 250
  • Evalue 1.30e-63
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 224.0
  • Bit_score: 236
  • Evalue 7.70e-60
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB76840.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 224.0
  • Bit_score: 236
  • Evalue 3.50e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGGAACTGAACGGGACCCGCACGCTCGTGGCCGGTGCGACCGGGGTGCTGGGTGGCGGCATCGCCCGGTCCCTGCAGAAGGAGGGCGCCCGGCTGGTGCTGGCCGGCCGCGACGGCGACCGGCTGAGCGCGCTCGCCCGCGAGCTCGGCGACGTCCCCACCGCCGGGTTCGAGGCCCTCGACCTCGAACGCTGCGCCGCCGTCGTCGACGAGGCGGCCGACCACCTCGGCGGGTTGGACCTGCTCGTCGTCGCCTTCGGGGTGGCCGCGTTCGGACCCGGCGAGGAGGCCGGCGACGTGATCATCGAGCACCTGCTCACCGTCAACACGATGGCGCCGATGGCGATGGTTCGCCGTGCCGTGCAGAGGATGGACGGCTCGGGGACCCTGGCCGTGATCAGCGCGATCCTCGCCGACGTGCCCACGCCCGGGATGGCCGCCTACTCCGCCAGCAAGGCCGGGCTGTCGGCCTGGCTGACGGCGCTGCGCGGTGAGCAGCGACGCAGGGGCGTCACGGTGTTCGACATCCGGCCGCCCCACATCGAGACGGGCCTGGCCGGCCGCGCGCTGGAGGGTGAGGCCCCGCCGATGAAGGAGGGCGCGACCCGGGACGAGCTGGTCGGCCTGGTGGTCGACGACATCCGCGACGGGCGCCGCGAGCTGGCCTTCGACCTGCAGAAGCGGGAGTGGACGGGCCGCTAG
PROTEIN sequence
Length: 234
MELNGTRTLVAGATGVLGGGIARSLQKEGARLVLAGRDGDRLSALARELGDVPTAGFEALDLERCAAVVDEAADHLGGLDLLVVAFGVAAFGPGEEAGDVIIEHLLTVNTMAPMAMVRRAVQRMDGSGTLAVISAILADVPTPGMAAYSASKAGLSAWLTALRGEQRRRGVTVFDIRPPHIETGLAGRALEGEAPPMKEGATRDELVGLVVDDIRDGRRELAFDLQKREWTGR*