ggKbase home page

SCNpilot_cont_500_bf_scaffold_746_113

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(110636..111250)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMW2_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 192.0
  • Bit_score: 265
  • Evalue 5.70e-68
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 192.0
  • Bit_score: 265
  • Evalue 1.80e-68
Regulatory protein TetR {ECO:0000313|EMBL:AEA25061.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 192.0
  • Bit_score: 265
  • Evalue 7.90e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 615
GTGACGTCGAGCGTGGGGCCGGGACCGGGACGACGGCGCGGGCGACGGCCCGGTGGCACCGACACCCGCGGACAGCTGCTGGACGCCGCGCGCGTCGAGTTCGCCGAGTGGGGTTACGAGAAGGCGACGGTCCGCAAGATCGCCGAGCGGGCCGGCGTGGACGCGGCGATGGTCAACCACTGGTTCGGGGGCAAGGAGGCGCTGTTCACGGCGTCGCTGGACATCCCGGTCGACCCCACCGAGATCCTGGCGACCATCCTCCCCGGCGATCCGGAACACCTCGGCGAACGGGTCGTCGAGATGTTCCTGACGGTCTGGGACGCCACCGGCGGCGGCCCGCTGGCCGCGATGGTGCACAGCATCGCCAGCCACGAGGAGGCGGCGCGGATGATGCGGGAGTTCATCGTCAACGTGCTGGTCGGACGCATCGTCGAAGCCGTCGCCCCCGACCAGCACGACCTGCGGGCCGGGTTGTGCGGCTCGCAGGTGTTCGGGATGGGCATGGTGCGCTACGTGCTGAAACTGGAACCGATGGCCTCGGCCGACCACGCGACGCTGGTGGCGGCGGTGGCCCCGACGATCCAGCGCTACCTGACGGCCCCCCTGACGACCTGA
PROTEIN sequence
Length: 205
VTSSVGPGPGRRRGRRPGGTDTRGQLLDAARVEFAEWGYEKATVRKIAERAGVDAAMVNHWFGGKEALFTASLDIPVDPTEILATILPGDPEHLGERVVEMFLTVWDATGGGPLAAMVHSIASHEEAARMMREFIVNVLVGRIVEAVAPDQHDLRAGLCGSQVFGMGMVRYVLKLEPMASADHATLVAAVAPTIQRYLTAPLTT*