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SCNpilot_cont_500_bf_scaffold_544_18

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 17396..17959

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=2 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=G8XDI4_STREN similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 202.0
  • Bit_score: 123
  • Evalue 1.90e-25
HTH-type transcriptional regulator BetI {ECO:0000313|EMBL:KJL36052.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 201.0
  • Bit_score: 153
  • Evalue 3.10e-34
HTH-type transcriptional regulator tcmR similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 202.0
  • Bit_score: 123
  • Evalue 5.90e-26

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGGAGGGCCGCCGCGACCGCAAGAAGACCGAGACCCGGACGGCCCTGCGCGAGGCCGCCCAGCGGCTGTTCGCCGAGCGGGGCTTCGACGCCACCACCGTCGAGGAGATCACCGACGCCGTCGACGTCTCCCGGCGCACGTTCTTCCGCTACTTCGGCAGCAAGGAGGACCTGCTCCGCCTCGATGCCGCCGACCTGCTCCCCGAGATGCTGGAGACCCTGCGCGCCCGGCCCGCCGCGGAGCCGCCGCTGCGGTCGATCCTGGCCACGCTGCGCACCGTGATCGATCGGCTGGAGCCGCCCAGCACGGGTGTCGGGCTGTTGCGCCTGTTCGCCGGCTGGGAGCAGGGCATCACCGACACCCTCGTCCAACGCTGGGGCGACGACGCACCCGCCCTGCGCCTGCGCGCCACCGTCATCGCGTGCGCGGCCACGTCGGCGCTGCGCAGCTCGGTGCAGGTGCACCGGACCCGCCACGACGGCCCGGCGCTGGGCTCGCCCCACCTGCTGCCGCTCGTCGAGGAGGCGTTCGCGGTGCTCGGGGACGGGTGCTCGGCGCCGTGA
PROTEIN sequence
Length: 188
MEGRRDRKKTETRTALREAAQRLFAERGFDATTVEEITDAVDVSRRTFFRYFGSKEDLLRLDAADLLPEMLETLRARPAAEPPLRSILATLRTVIDRLEPPSTGVGLLRLFAGWEQGITDTLVQRWGDDAPALRLRATVIACAATSALRSSVQVHRTRHDGPALGSPHLLPLVEEAFAVLGDGCSAP*