ggKbase home page

SCNpilot_cont_500_bf_scaffold_820_14

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(10998..11498)

Top 3 Functional Annotations

Value Algorithm Source
Integral membrane protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKE7_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 162.0
  • Bit_score: 223
  • Evalue 1.50e-55
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 162.0
  • Bit_score: 223
  • Evalue 4.80e-56
Integral membrane protein {ECO:0000313|EMBL:AEA22687.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 162.0
  • Bit_score: 223
  • Evalue 2.20e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 501
GTGGCCACCCCGACCAGCGCAGGCGGCGCGGAGGTCCCTCCGGTGCTGCCCTCGATCCCGCTCTCCAAGGAGCCGGTCACCCCCGTGGGCGAGCAGTCCATCGGAGGCCTCGTCAAGGAGGCCACCGCGCACGTCTCCACGCTCGTGCGCGCGGAGGTCGAGCTCGCCCGCGCCGAGGTCACCGCCGAGGTCAAGAAGGGGCTGCAGGGCAGCATCTTCTTCATCGTCGCGCTCGTGATCGCGCTGTTCAGCCTGTTCTACCTGTTCTTCACGATCGCCGAGGTGATCGCCATCTGGCTGCCACGATCGGCGGCGTTCGGCATCACGTTCGCCCTGATGCTCCTGGTGGCGGGCCTGTTCGGGTTCCTCGGCTACCTGCGGGTGCGCAAGATCCGCAAGCCCGAGCGCACCATCTCCAGCCTCAAGGACTCCGCGCAGGTGCTGTCGCAGCGCGGCCGTGGGGCCACTTCACCCGACCTGAACGGCCACAGCCTCAACTGA
PROTEIN sequence
Length: 167
VATPTSAGGAEVPPVLPSIPLSKEPVTPVGEQSIGGLVKEATAHVSTLVRAEVELARAEVTAEVKKGLQGSIFFIVALVIALFSLFYLFFTIAEVIAIWLPRSAAFGITFALMLLVAGLFGFLGYLRVRKIRKPERTISSLKDSAQVLSQRGRGATSPDLNGHSLN*