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SCNpilot_cont_500_bf_scaffold_828_1

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(3..311)

Top 3 Functional Annotations

Value Algorithm Source
excinuclease ABC subunit C n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEC15 similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 103.0
  • Bit_score: 205
  • Evalue 2.70e-50
UvrABC system protein C; K03703 excinuclease ABC subunit C similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 103.0
  • Bit_score: 200
  • Evalue 3.50e-49
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 103.0
  • Bit_score: 200
  • Evalue 1.60e-48

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGCCTGATCCCTCCACCTACCGCCCCGCCACCGGGTCCATCCCGGAGCAGCCGGGCGTGTACCGCTTCTCCGACCCCCGCGGCCGGGTCATCTACGTGGGCAAGGCCAAGAGCCTGCGCCAGCGCCTCAACTCCTACTTCGCCGACGTCTCGGGCCTGCACCCGCGCACCCGGCAGATGGTCACCACGGCCTCGCAGGTGCAGTGGACCGTGGTGGGCACCGAGGTCGAGGCGCTGCAGCTCGAGTACAACTGGATCAAGGAGTTCGACCCGCGGTTCAACGTCCGCTACCGCGACGACAAGACCTAC
PROTEIN sequence
Length: 103
MPDPSTYRPATGSIPEQPGVYRFSDPRGRVIYVGKAKSLRQRLNSYFADVSGLHPRTRQMVTTASQVQWTVVGTEVEALQLEYNWIKEFDPRFNVRYRDDKTY