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SCNpilot_cont_500_bf_scaffold_828_45

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 49976..50458

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFED12 similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 158.0
  • Bit_score: 311
  • Evalue 7.10e-82
  • rbh
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 158.0
  • Bit_score: 308
  • Evalue 1.40e-81
  • rbh
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEA25702.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 158.0
  • Bit_score: 308
  • Evalue 6.40e-81

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGGGCGACTACGCCAAGGCGCTCGGCGGCAAGCTGCGCGCCATCCGGCAACAGCAGGGCTTGTCGCTGCACGGAGTGGAACAGAAGTCGGGCGGTCGCTGGAAGGCCGTCGTCGTCGGCTCGTACGAGCGCGGCGACCGGGCCGTCACGGTGCAGAAGCTGGCCGAGCTGGCCGACTTCTACGGCGTTCCCGTGGCCGAACTACTCCCCGAGGGGCGCGTGCCGTCCGGCTCCGAGCCGGCCACGAAGATCGTCATCAACCTGGAGCGGCTGCAGCAGCTCCCGGCCGACAAGGTCGGCCCGCTCGCCCGTTACGCCGCCGCGATCCAGAGCCAGCGCGGTGACTACAACGGCAAGGTCCTCTCGATCCGTGCCGAGGACCTCCGGTCGCTGTCGATCATCTACGACATGACGCCCGGCGAGCTCACCGACCAGCTCATCGACTGGGGCGTCCTGCCTCCCGAGGCGCGCCCCGTCTCGTAG
PROTEIN sequence
Length: 161
MGDYAKALGGKLRAIRQQQGLSLHGVEQKSGGRWKAVVVGSYERGDRAVTVQKLAELADFYGVPVAELLPEGRVPSGSEPATKIVINLERLQQLPADKVGPLARYAAAIQSQRGDYNGKVLSIRAEDLRSLSIIYDMTPGELTDQLIDWGVLPPEARPVS*