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SCNpilot_cont_500_bf_scaffold_828_73

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 75149..75940

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUF3_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 252.0
  • Bit_score: 297
  • Evalue 1.30e-77
SigB/F/G subfamily RNA polymerase sigma-28 subunit; K03090 RNA polymerase sigma-B factor similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 252.0
  • Bit_score: 297
  • Evalue 4.20e-78
RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily {ECO:0000313|EMBL:AEA25343.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 252.0
  • Bit_score: 297
  • Evalue 1.90e-77

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 792
GTGACCAGCGCTTCGACCATCGTTGCCCCGCGTACGTCGGGCCGCGACAGCTACGACCACCTGGCTCCGGTGCTCGCCGAGTACGCCGCTCTCGACCGCTCCGACCCGCGGCGGCGGGTGCTGCGCGACGAGCTGGCCACGGCCTACCTGCCCGTCGTGCACCACATCGCCCGGCGCTACAGCGGCCGTGGGGAGCCGACCAACGACCTGGAGCAGGTCGGGGCGGTCGCCCTGCTCGGGGCGCTCGAGCGGTTCGACCCGGAACGGGGCGCCGAGTTCCTCAGCTTCGCGATCCCGACGATCACGGGCGAGGTGCGCAAGCACTTCCGCGACCGGACGTGGTCGATGCGGGTCCCCCGCCGGCTCAAGGATCTGCAGGGGCCGATCGGCGAGGCCGTCACCACGCTGTCGGCCACGCTCAACCGGGCGCCGCGTCCCAGCGAGATCGCCGACCACCTCGACGTGCCCGTCGGCGAGGTCGTGGACGCGCTGGGCGCCCAGCGCGCCTACTCCGCGGACTCCCTCGACGCCCTCACCCACTCCGGCGACACCTCGCTGCTCGACCTGCTGGGCCGGGCGGACGCGGAGCTGGTCAAGGCGGAGTACCGCGACGAGCTGCGCCGGGCGCTGGCCGACCTCCCCGACCGCGAACGGACGATCGTCATCCTCCGGTTCTTCGGCGACCTCACCCAGACCGAGATCGCCGCCAAGGTCGGCCTGTCGCAGATGCACGTCTCCCGGCTGCTGGCGAGCACGCTCGCGACGCTGCGGGCGCGCATCGACGTCAGCTGA
PROTEIN sequence
Length: 264
VTSASTIVAPRTSGRDSYDHLAPVLAEYAALDRSDPRRRVLRDELATAYLPVVHHIARRYSGRGEPTNDLEQVGAVALLGALERFDPERGAEFLSFAIPTITGEVRKHFRDRTWSMRVPRRLKDLQGPIGEAVTTLSATLNRAPRPSEIADHLDVPVGEVVDALGAQRAYSADSLDALTHSGDTSLLDLLGRADAELVKAEYRDELRRALADLPDRERTIVILRFFGDLTQTEIAAKVGLSQMHVSRLLASTLATLRARIDVS*