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SCNpilot_cont_500_bf_scaffold_726_3

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 486..1082

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator of the TetR family n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RGN1_FRAAA similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 192.0
  • Bit_score: 272
  • Evalue 4.50e-70
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 192.0
  • Bit_score: 272
  • Evalue 1.40e-70
Putative transcriptional regulator of the TetR family {ECO:0000313|EMBL:CAJ63356.1}; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 192.0
  • Bit_score: 272
  • Evalue 6.30e-70

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Taxonomy

Frankia alni → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 597
GTGGCCGAGCGCTCGCTGACGCGGAAGGGCGCGGCCACCCGGAACCGGATCGTGGAGGGGGCCGCAGCCGAGATCCGCGAGCGCGGGATCCTGCGCACCACCCTGGACGACGTCCGCGCGCGCACCAGCACCAGCAAGAGCCAGCTGTTCCACTACTTTCCCGAGGGCAAGGACGAGCTGCTGCTCGCCGTGGCGCGGTACGAGGCAGAGCGTGTGCTCGACGACCAGCAGCCCCACCTCGGAGACCTCTCCTCATGGGAGGCATGGCAGGCCTGGCGCGACGCGCTGCTCGCCCGCTACGTCGCACTGGGCCCGGACTGCCCGCTGAACGCGCTGAACTCGGAGCTGGGTCGGACCTCTCCGGGCGCCCAGGCCGTCTCGCGCGAGCTGATGCGACGGTGGCAGGGGCAGCTCGCGTCGGGGATACGGCGGATGCAGGACTCCGGGGACGTCACCGACCTGCTCGACGCCGACCGCGCCGCCGCCGCCCTGCTCGCCGGCATCCAAGGCGGGGTGCTCCTGCTGCTTACCACCGGCAGCGCCGAGCATCTCGAAGCAGCCCTGGACGTCGGGCTCGACCAGCTCAGGAAGCGCTGA
PROTEIN sequence
Length: 199
VAERSLTRKGAATRNRIVEGAAAEIRERGILRTTLDDVRARTSTSKSQLFHYFPEGKDELLLAVARYEAERVLDDQQPHLGDLSSWEAWQAWRDALLARYVALGPDCPLNALNSELGRTSPGAQAVSRELMRRWQGQLASGIRRMQDSGDVTDLLDADRAAAALLAGIQGGVLLLLTTGSAEHLEAALDVGLDQLRKR*