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SCNpilot_cont_500_bf_scaffold_726_40

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 34891..35652

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNE2_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 246.0
  • Bit_score: 415
  • Evalue 3.20e-113
  • rbh
winged helix family two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 246.0
  • Bit_score: 415
  • Evalue 1.00e-113
  • rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEA27166.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 246.0
  • Bit_score: 415
  • Evalue 4.50e-113

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGCAGGCAGATGGGCCGGGGAGCGGGATGGACGAGCGGGCACAGGGTGACCGCTCCCTGCGCCGCCCCGACGGCAGCGCCATCCGTGTCCTGGTCGTCGACGACGAGTCCAGCCTGTCCGACCTGCTGTCCATGGCCCTGCGCTACGAGGGCTGGGAGGTGCGCACCGCCGCCGACGGCACGTCCGCCGTGCGCACGGCGCGGGAGTTCCGCCCCGACGCCGTCGTCCTCGACGTCATGCTGCCCGACTTCGACGGCCTCGAGGTGCTGCGCCGCATGCGCGCCGACACCGCCGACGTGCCGGTCCTGTTCCTCACCGCCCGCGACGCCGTGGAGGACCGCGTCGCCGGCCTCACCGCGGGCGGCGACGACTACGTCACCAAGCCGTTCAGCCTCGAGGAGCTCGTCGCGCGCCTGCGCGGGCTGCTGCGCCGCTCGGGCATGTCCGCGGCCCGCCAGGGTTCCGAGCTGGTCGTCGGCGATCTCGTCCTCGACGAGGACAGCCACGAGGTCCGCCGCGGCGACGACGTCGTGGAGCTCACGGCCACCGAGTTCGAGCTGCTGCGCTTCCTCATGCGCAACCCCAAGCGCGTGCTGAGCAAGGCCCAGATCCTCGACCGCGTGTGGAACTACGACTTCGGCGGCCAGTCCAACGTGGTCGAGCTCTACGTCTCCTACCTGCGCAAGAAGATCGACGCCGGCCGCTCCCCGATGATCCACACCGTGCGGGGTGCCGGCTACGTCCTGAAACCGGCGGCCTAG
PROTEIN sequence
Length: 254
MQADGPGSGMDERAQGDRSLRRPDGSAIRVLVVDDESSLSDLLSMALRYEGWEVRTAADGTSAVRTAREFRPDAVVLDVMLPDFDGLEVLRRMRADTADVPVLFLTARDAVEDRVAGLTAGGDDYVTKPFSLEELVARLRGLLRRSGMSAARQGSELVVGDLVLDEDSHEVRRGDDVVELTATEFELLRFLMRNPKRVLSKAQILDRVWNYDFGGQSNVVELYVSYLRKKIDAGRSPMIHTVRGAGYVLKPAA*