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SCNpilot_cont_500_bf_scaffold_735_10

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 8377..9357

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 (EC:2.7.7.6); K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 331.0
  • Bit_score: 464
  • Evalue 2.40e-128
  • rbh
RNA polymerase factor sigma-70 n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WZQ7_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 339.0
  • Bit_score: 469
  • Evalue 3.20e-129
  • rbh
Sigma-70 region 2 domain protein {ECO:0000313|EMBL:EWC59315.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 333.0
  • Bit_score: 485
  • Evalue 6.00e-134

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Taxonomy

Actinokineospora spheciospongiae → Actinokineospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGGGTGATGTTTCTGTGCTGGACCCGGATCTGGCCCGCGCGCGGGCCGGTGACGACGCGGCGTTCGGCCGGCTCGTCGCGCCGCTGCGCCGCCAGCTGCACGCCCACTGCTACGGCATGCTCGGCTCCGTCCACGACGCCGACGACGCGCTGCAGGAGGCGCTCGTGCGGGCGTGGCGCGGGATCGACCGCTTCGAGGGCCGCAGTTCCCTGCGCTCGTGGCTCTACACCGTGGCCACCCGCACCTGTCTCGACAGCATCACGAGCCGGGGCCGCCGCGCCCTGCCGATGGACCTGGGCCCGTCGAGCGCGGCGGTGGTGGCCGGCGACACGCCGCTGTCCGACGTCGCGTGGCTCGGCCCGTACCCCGACGCCGATCCCGAGCAGCGCGCGTCCGTCGAGCTGGCGTTCGTGGCCGCCTGCCAGCACCTGCCGGGCAACCAGCGCGCGGCGCTGCTGCTGTTCGAGGTGCTCGGCTTCTCCGCCGCCGAGATCGCCACGATCATGGACACGTCCACCGCGTCGGTGAACAGCGCCCTCCAGCGCGCCCGGAAGATCGTCGCGGAGCGGGTGCCGTCCCGCGAGGAGCAGCCCGCGGCCCGCGACGCCCGCACCCGGGAGGTCGTCAGCGGCTACACGGCGGCACTGGAGAGCGGGGACGCGCAGGCTCTGGTCGCGCTGCTCACCGAGGACGTCACGTGGTCGATGCCCCCGCTGCCGCGCTGGTACCGGGGCATCGACGCCGTCATGGACTTCGTCGTGGCGGTGCCGCTGGGGAGCTGCGGGGCCTGGCGGCACGTCCCCACCAGCGCGAACGGGCAGCCGGCCGTGGCCGCCTACCTGCGCCCGGGCGACACGGGCGCCCACGACGCGTGGTCGATCAACGTCCTGACGATGCGGGGCGACCGGATCGCCGAAGTCACGTCGTTCATCGGCGCGGAGCACTTCGCGGCGTTCGGACTGCCCCCGTCGCTGCCCTGA
PROTEIN sequence
Length: 327
MGDVSVLDPDLARARAGDDAAFGRLVAPLRRQLHAHCYGMLGSVHDADDALQEALVRAWRGIDRFEGRSSLRSWLYTVATRTCLDSITSRGRRALPMDLGPSSAAVVAGDTPLSDVAWLGPYPDADPEQRASVELAFVAACQHLPGNQRAALLLFEVLGFSAAEIATIMDTSTASVNSALQRARKIVAERVPSREEQPAARDARTREVVSGYTAALESGDAQALVALLTEDVTWSMPPLPRWYRGIDAVMDFVVAVPLGSCGAWRHVPTSANGQPAVAAYLRPGDTGAHDAWSINVLTMRGDRIAEVTSFIGAEHFAAFGLPPSLP*