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SCNpilot_cont_500_bf_scaffold_735_20

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(16676..18070)

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Amycolatopsis methanolica RepID=UPI00035C72D8 similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 451.0
  • Bit_score: 590
  • Evalue 1.30e-165
  • rbh
General substrate transporter {ECO:0000313|EMBL:AIJ26813.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 451.0
  • Bit_score: 590
  • Evalue 1.90e-165
arabinose efflux permease family protein similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 456.0
  • Bit_score: 536
  • Evalue 9.40e-150
  • rbh

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Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1395
GTGGACGACAGCGGGATCACCATCACCGACGAACAGACGATGAGACGTGCGGTGGCAGCGGCGGCCATCGGCAACGTGACGGAGTGGTACGACTTCGGCGTCTACTCCTACCTCGCGGTCGTCATCACGAAGGTGTTCTTCTCGAACCTGCCCCCGGCCACGGCCACGGTCTACACGTTCGGCGTGTTCGCGGTGTCGTTCATCGTCCGTCCCATCGGTGGGCTGATCTTCGGCCCGCTGGGCGACCGGATCGGCCGGACCAAGGTGCTCGCCATCACGGTGATCATGATGGCGGCGGGCACCACAGTGCTGGGCCTGATCCCGGGCTACGCGAGCATCGGCGTCGCCGCGCCGCTGCTCGTGCTGCTCGTGCGCGTCGTGCAGGGCCTGTCCACGGGCGGTGAGTACGGCGGCGCAATGACGTTCATCGCCGAGTACTCCGCCGACCGGCGGCGCGGGTTCTTCGGCAGCTGGCTGGAGTTCGGCACGCTCACCGGGTACGCGATGGGGGCCACGTTCTCCGCCGTCCTGATCGCCGTGCTCCCGCCGGAGCAGATGGAGAGCTGGGGCTGGCGCATCCCGTTCCTGCTCGCGTTCCCGCTCGGCGTGGTCGGGCTCTACCTGCGCTCGCGGCTGGAGGAGACCCCGGCGTTCCAGGTGATGGTGGCCCGGTCGGAGACCCACGAGGGCACCTCCACCCAGGACGCCTTCCGGCTGATCTTCACCAGGCACTGGCGCGCGATGCTGCTCGCCGGCGGGCTCGTCGTGGGGTGGAACGTCACGAACTATGTGCTCACCGCCTACATCCCCACCTACCTGACCTCGACGCTGCCGGCCGCGGGGGAGGCCGGCACGTCGGAGTCGGCGTCGAACATCCTGCAGATCGTGGTGCTGCTGATCCTGATGGTGATCATCACGTTCATCGGGCGGCTCTCCGACCGGGTGGGCCGCAAGCCGATCCTCTACACGGGCTGCATCGCGCTGATCGTCCTGGGCCTGCCCACGATCCTGCTGCTGCGCGTCGGCGGCCTCGGGGCCACGTTCGGCGGCCTGATGATCATGGGGCTGACGCTGGTGCTGTTCTCGGCCGTCTCGCCGTCCACGCTCCCGGCGCTGTTCCCGACGGAGATCCGCTACAGCGGCCTGTCCATCGCGTTCAACATCTTCGTCTCGGCGTTCTGCGGGACGGCGGCCACGGTCATCGCGGCGCTCGTGCTGGTCAGCGGGGATCTCAACTGGCCCGGTTACTATCTGATCGCCGCCGGCGTCGTGGGCCTGATCAGCGTGTACCTCGTACAAGAGACAGCCGGCCGCCCCCTGGACGGCTCCCCGCCCGCGGTGGCCACCGAGCAGGAGGCACGTGACCTGGTGGCGGCCCGGGACGCGCCCGCCTGA
PROTEIN sequence
Length: 465
VDDSGITITDEQTMRRAVAAAAIGNVTEWYDFGVYSYLAVVITKVFFSNLPPATATVYTFGVFAVSFIVRPIGGLIFGPLGDRIGRTKVLAITVIMMAAGTTVLGLIPGYASIGVAAPLLVLLVRVVQGLSTGGEYGGAMTFIAEYSADRRRGFFGSWLEFGTLTGYAMGATFSAVLIAVLPPEQMESWGWRIPFLLAFPLGVVGLYLRSRLEETPAFQVMVARSETHEGTSTQDAFRLIFTRHWRAMLLAGGLVVGWNVTNYVLTAYIPTYLTSTLPAAGEAGTSESASNILQIVVLLILMVIITFIGRLSDRVGRKPILYTGCIALIVLGLPTILLLRVGGLGATFGGLMIMGLTLVLFSAVSPSTLPALFPTEIRYSGLSIAFNIFVSAFCGTAATVIAALVLVSGDLNWPGYYLIAAGVVGLISVYLVQETAGRPLDGSPPAVATEQEARDLVAARDAPA*