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SCNpilot_cont_500_bf_scaffold_1577_27

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 24165..25901

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transporter, periplasmic subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT36_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 583.0
  • Bit_score: 958
  • Evalue 4.00e-276
  • rbh
ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 583.0
  • Bit_score: 958
  • Evalue 1.20e-276
  • rbh
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEA26254.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 583.0
  • Bit_score: 958
  • Evalue 5.60e-276

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1737
ATGAGTAGTAGGCGCAGAGTCGCCGTGGTCGCGCTGGGCGCGGTCTCGGCGTTGGTCCTCGCGGCGTGCGGGGGTGGTTCGGCGAGCAGCTCGTCGGGCTCCTCGGCCGCGGCGAACGGGATCAGCAACCCGTCCGACGTCACCGGCGGCACGATCCGGATGGCGAACTCCGGCGACTGGGACTCCCTCGACCCCGCTGACACCTACTATGCCTACTCCTGGAACTTCGCCCGGCTCTACGGCCGCTCGCTGGTGATGTTCAAGTCGGCGCCCGGGGCCGCCGGCGCCACGCTGGTGCCCGACCTCGCCGAGAGCCTCGGTGTCCCCACCGACAACGCCAAGACGTGGACCTACAAGCTGCGCACCGGGGTCAAGTTCGAGGACGGCACGCCCGTCACCAGCAAGGACGTCAAGTACGCGGTCGAGCGATCGTTGGACAAGGACACGTTCCCCAACGGCCCGACCTACTTCAACGACGCGTTCGACCTGCAGGGCTACACCAGTCCCTACAAGGACACGAGCCCGGACAAGCTCGGGCTCAAGGCGATCGAGACCCCCGACGACCAGACGATCGTCTTCCATCTCAAGAGCCCGTTCAGCGGCTTCGACTACTTCGCCCAGCTGCCGGCCACGATGCCGGTCCCGGTCGCCAAGGACACGGGTACGAAGTACAAGGAGCACGTGGTCTCCACGGGCCCCTACATGTTCAAGACCAACGAGCTCGGTAAGAGCTTCACGCTGGTGCGCAACCCCAACTGGGACCAGGCCACCGACCCCAACCGCAAGCCGCTGCCCGACGGCTACGACGTCGCGCTCAACGTCAACGCCGACGACATCGACAACCGGCTTCAGTCCGGCGATCTCGACGTCGCGGTGGAGGGCACGGGCGTCGGTCCGTCGGCGCAGGGCAAGATCCTGGCGGACGCGTCGCTCAAGAAGAACACCGACGAGGCCACGGTGGCCCGGCTCTGGTACGCCAACATCAACTCCGACGTCGCTCCGTTGGACAACGTCCACTGCCGTATGGCTGTCGAGTACGCGGCCGACAAGACCGGCTACCAGCGTTCCTACGGTGGTGCCACGGGCGGTGAGATCGCCAGCAACCTGTTGCCCCCGGTCATCCCGGGTTCGGAGAAGTTCGACGACTACGCCACCCCGAACAACGCCGGCGACGTGGCGAAGGCGAAGGACCAGCTGGCGCAATGCGGCCAGCCAGGAGGGTTCTCCACGAGCATCTCCTACCGGGCGGAGCGTCCGAAGGAGAAGGCGACGGCCGAGTCGCTGCAGCAGTCGCTGGCCAAGGCGGGCATCAACCTGACGATCAAGCCCTACCCGAGCGGCGACTACTTCAAGCTCTACGCGGGCAAGCCGGACTTCGCCAAGGCCAACGGCCTCGGCATCATGATCACCGGTTGGGGCGCCGACTGGCCGGACGGCTACGGCTTCCTGGCTCAGATCGTCGACAGCCGGGTGATCCGCGCCGCGGGCAACACGAACCTCGGTGTGAAGGACCCCGAGGTCGACGCGATGATCGACAAGGCGCTGCAGACCACGGACACGGCGGCTCGGGAGAAGATCTGGGTCGACATCGACAAGAAGGTCATGACCGACGCCTACATCCTGCCGGGCATCTGGGCGAAGGGGCTGCTGTACCGGCCGCCGAACCTGACCAACGCCTTCATCTCCGACGGGTTCCAGATGTACGACTACCTGGCGTTGGGCACCACCCGGAAGTGA
PROTEIN sequence
Length: 579
MSSRRRVAVVALGAVSALVLAACGGGSASSSSGSSAAANGISNPSDVTGGTIRMANSGDWDSLDPADTYYAYSWNFARLYGRSLVMFKSAPGAAGATLVPDLAESLGVPTDNAKTWTYKLRTGVKFEDGTPVTSKDVKYAVERSLDKDTFPNGPTYFNDAFDLQGYTSPYKDTSPDKLGLKAIETPDDQTIVFHLKSPFSGFDYFAQLPATMPVPVAKDTGTKYKEHVVSTGPYMFKTNELGKSFTLVRNPNWDQATDPNRKPLPDGYDVALNVNADDIDNRLQSGDLDVAVEGTGVGPSAQGKILADASLKKNTDEATVARLWYANINSDVAPLDNVHCRMAVEYAADKTGYQRSYGGATGGEIASNLLPPVIPGSEKFDDYATPNNAGDVAKAKDQLAQCGQPGGFSTSISYRAERPKEKATAESLQQSLAKAGINLTIKPYPSGDYFKLYAGKPDFAKANGLGIMITGWGADWPDGYGFLAQIVDSRVIRAAGNTNLGVKDPEVDAMIDKALQTTDTAAREKIWVDIDKKVMTDAYILPGIWAKGLLYRPPNLTNAFISDGFQMYDYLALGTTRK*