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SCNpilot_cont_500_bf_scaffold_1690_27

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(27620..27964)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Streptomyces sp. TOR3209 RepID=UPI0002E526AE similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 102.0
  • Bit_score: 100
  • Evalue 1.40e-18
Sigma factor {ECO:0000313|EMBL:EIF93994.1}; TaxID=1114943 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces tsukubaensis NRRL18488.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 101.0
  • Bit_score: 96
  • Evalue 3.60e-17
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 83.0
  • Bit_score: 91
  • Evalue 1.50e-16

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Taxonomy

Streptomyces tsukubaensis → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 345
GGGGACCCGGCCGCGCTGCGCGAGCTCTACGACCGGCACGCGGCCGTCGTGCACGGTTTCGCGCTGCGCCGCCTGCGCGAGCACCACGACGCCGAGGACGTCACGCAGCAGGTGTTCGTGCGGGCGTGGCGCGGCCGGGCCACGCCCGATCCCCGGCGCGGGCCGGTCGGGGGCTGGTTGATGGGCATCACCCGCCACCAGATCGCCGACCGGCTCACCGCCCGCACCCGCGACACCGAGCGGCTGGCGTTCTTCGACGACCTGACACACCACATCTCGGCGGAGAAGTGGGACGGCAATCCCGGGCACTCGCGGATCAGCCTGCTGCGGGGCACGGTGCTGTGA
PROTEIN sequence
Length: 115
GDPAALRELYDRHAAVVHGFALRRLREHHDAEDVTQQVFVRAWRGRATPDPRRGPVGGWLMGITRHQIADRLTARTRDTERLAFFDDLTHHISAEKWDGNPGHSRISLLRGTVL*