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SCNpilot_cont_500_bf_scaffold_4642_4

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(2876..3784)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN14_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 303.0
  • Bit_score: 387
  • Evalue 1.10e-104
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 303.0
  • Bit_score: 387
  • Evalue 3.50e-105
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEA26027.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 303.0
  • Bit_score: 387
  • Evalue 1.60e-104

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGGACGTCCAGCGGCTGCGGGTGCTGCGGGAGCTGGCCGACCGCGGCAGCGTCGCCGCCGTCGCCGACGCGCTGTCGTTCACGCCGTCGGCGATATCGCAGCAGCTCAAGGCCCTGGCCGAGGAGGTCGGCATGCCGCTCACCGAGCCCGCCGGGCGCGGCCTGCGGCTCACCGACGTCGGGCGGGCCCTCGCGGCGGAGGCCGAGGGTGTCCTGACGGCGCTCGCCCGGGCCGACGCGGCCGTCGAGCGGCTGCGCACCACGCCGCGCGGGCAGGTGCGGATGGCGATCTTCCCGTCGGGGGCGCGGATGCTGCTGCCGGGCGTGCTGGCCCGCCTCGACGACGTCGCGGAGGTGGATCTGCAGTGCCGTGACGTCGACATGAACCCCGCCGAGGTGACCGCGCTCGCGGCCGATTTCGACGTGGTGGTCACCCACCGCGACGAGCACGCGCCGCCGCACGCGGTCGAGCGCCGCGTGGTGGTGCCGCTGCTGCGCGAGCCCCTCGACGTCGTCCTCCCGCCCGGGCACCTCCTCGCCCGGCGCCGGAAGGTGCGGCTCGACGAGCTGGCCGGCGAGGCGTGGATCAGCGTGGAGGTCGGCTGGCCCGTCGACGACGTGCTGCGGCCCCTGGCTCTGCACACCGATACGCGGCCGCGGATCGTCCAGCGCATCAACGACTTCTCCGTCACCGAGGAGCTGGTGGCCGCGGGCCGGGGCGTCGCGCTGCTGCCCCGCTACTCCACGGACGACCGCGGCGGACGGCGGCTCGTGCGCAGGCCGCTGGCCGGGGTGCGGGCCGCCCGGTTGGTGGAGGCGGTGCTGCGCACGAGCGCGGCCGAGCGGCCGGCCGTCCGCACGGTGCTCGACGCGCTGTGTGCCGAGGCGGCGTCACTGACCGGGGCGTAG
PROTEIN sequence
Length: 303
MDVQRLRVLRELADRGSVAAVADALSFTPSAISQQLKALAEEVGMPLTEPAGRGLRLTDVGRALAAEAEGVLTALARADAAVERLRTTPRGQVRMAIFPSGARMLLPGVLARLDDVAEVDLQCRDVDMNPAEVTALAADFDVVVTHRDEHAPPHAVERRVVVPLLREPLDVVLPPGHLLARRRKVRLDELAGEAWISVEVGWPVDDVLRPLALHTDTRPRIVQRINDFSVTEELVAAGRGVALLPRYSTDDRGGRRLVRRPLAGVRAARLVEAVLRTSAAERPAVRTVLDALCAEAASLTGA*