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SCNpilot_cont_500_bf_scaffold_3248_7

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_12_partial

partial RP 22 / 55 MC: 1 BSCG 23 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 4468..5775

Top 3 Functional Annotations

Value Algorithm Source
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] similarity KEGG
DB: KEGG
  • Identity: 96.5
  • Coverage: 434.0
  • Bit_score: 835
  • Evalue 9.20e-240
  • rbh
Serine hydroxymethyltransferase {ECO:0000255|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000255|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000255|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000255|HAMAP-Rule:MF_00051};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 434.0
  • Bit_score: 835
  • Evalue 4.10e-239
Serine hydroxymethyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=GLYA_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 434.0
  • Bit_score: 835
  • Evalue 2.90e-239
  • rbh

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1308
ATGGATTCGACCGCCAAAACCGCCTCCGCACCTGATTCCTTCTTTGCGGCCAACCTGACCGAGGCCGATCCCGAAATCGCTGCCGCGATCAAGGGCGAATTGGGTCGTCAGCGCCACGAGATCGAACTGATCGCGTCCGAAAACATCGTCAGCCGCGCGGTTTTGGAGGCGCAGGGCTCGGTATTGACCAACAAATACGCCGAGGGTTATCCGGGCGCGCGCTATTATGGTGGGTGCGAGTGGGTCGACGTCGTGGAAACGCTGGCGATCGAACGGGCCAAGAAACTGTTCGGCGCCCAGTTTGCCAACGTCCAGCCGAACTCAGGCAGCCAGATGAACCAGGCGGTGTTCCTGGCGCTGCTGCAACCCGGCGACACCTTCATGGGGCTCGACCTTGCGGCTGGTGGTCACCTGACCCACGGTGCGCCGGTCAACATGTCAGGCAAATGGTTCAAGGCCGCGCACTACACGGTGCGGCGGGACGATCATTTGATCGACATGGACGAGGTCGCGCGCCGGGCCGAGGAGGTCAAGCCGAAGCTGATCATCGCCGGCGGTTCGGCCTATTCGCGGCCGTGGGACTTCAAACGCTTTCGCGAGATCGCCGACAGCGTCGGGGCCTATCTGATGGTGGACATGGCGCACTTTGCCGGTCTTGTCGCGGGGGGCGTGCATGCTTCCCCGGTGCCGCACGCGCATGTGACCACGACCACCACCCACAAGTCGCTGCGCGGTCCGCGTGGCGGCCTGATCCTGTGCAATGACGAGGCGCTCGCCAAGAAGTTCAATTCGGCGATCTTTCCGGGCCTGCAGGGCGGACCGCTGATGCATGTCATCGCGGCCAAGGCCGTGGCATTCGGCGAAGCGCTGCGACCGGACTTCAAGCTTTACGCGAAGAACGTTGTCGAAAACGCCAAGGCGTTGGCCGAAAGCCTGCGTGGCCATGGCTTCGATATCGTCTCCGGCGGCACCGACAACCACCTGATGCTGGTTGACCTGCGACCCAAGGGGCTGAGAGGCAACGTCTCGGAAAAGGCGCTGGTCCGGGCGGCGATCACCTGCAACAAGAACGGCATTCCTTTCGATCCGGAAAAGCCGTTCGTGACCTCCGGTCTTCGTCTCGGCACGCCGGCCGCCACCACGCGGGGCTTCGGGGTTGCCGAATTCAGACAGGTCGGCGGCCTGATCGCGGAAGTGCTCAATGCCATCGCGCAGGCCGAGGACGGCAAGGCTCCGCTGGTCGAGGCGGCGGTGAAGGAGAAGGTCAAGGCGCTGACCGACCGTTTTCCAGTCTATCCAGACAGTTGA
PROTEIN sequence
Length: 436
MDSTAKTASAPDSFFAANLTEADPEIAAAIKGELGRQRHEIELIASENIVSRAVLEAQGSVLTNKYAEGYPGARYYGGCEWVDVVETLAIERAKKLFGAQFANVQPNSGSQMNQAVFLALLQPGDTFMGLDLAAGGHLTHGAPVNMSGKWFKAAHYTVRRDDHLIDMDEVARRAEEVKPKLIIAGGSAYSRPWDFKRFREIADSVGAYLMVDMAHFAGLVAGGVHASPVPHAHVTTTTTHKSLRGPRGGLILCNDEALAKKFNSAIFPGLQGGPLMHVIAAKAVAFGEALRPDFKLYAKNVVENAKALAESLRGHGFDIVSGGTDNHLMLVDLRPKGLRGNVSEKALVRAAITCNKNGIPFDPEKPFVTSGLRLGTPAATTRGFGVAEFRQVGGLIAEVLNAIAQAEDGKAPLVEAAVKEKVKALTDRFPVYPDS*