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SCNpilot_cont_500_bf_scaffold_3248_14

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_12_partial

partial RP 22 / 55 MC: 1 BSCG 23 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(10700..11719)

Top 3 Functional Annotations

Value Algorithm Source
ribonuclease; K08300 ribonuclease E [EC:3.1.26.12] similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 348.0
  • Bit_score: 522
  • Evalue 1.30e-145
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 348.0
  • Bit_score: 522
  • Evalue 6.00e-145
Ribonuclease E n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMB1_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 348.0
  • Bit_score: 522
  • Evalue 4.30e-145

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGAAAGGTGCGACGCACAATCTTATCGTGCGGACCCGCACCAACGTCGCGCTGTATGTGCTCAACCAGAAGCGTGGTCATCTGCGCGACCTCGAACACAGCTTCAAGGTCGGTCTCTCCGTGGTCGCCGACCCTGCGATCGCCGGCCAGCAATCGTTCATCATTGATCGCGGTGAGCAGGTGCATACGCTGGAAGCCGCGAAAGCGGTGTTGGCCGCGCAACTTGCCGCGGTTCCTTCACAGGCGGAAGAAATCCATGAGGATGAGCAGCCGCTCGATATCGAGGCCGAAACCGGCGAGACCGAAGCCCGTGCCGACGAACAAACTGCTAGCGAAGAAGGCGACGGCCGCAAGCGGAAGCGCCGCCGGTCCCGGCGCGAACGATCCGTAGAAATCCGCGACGACCAAGCCGTGCCTGACGACGATACCGACAATGTCCTGATCCCCGCTGATTTCGCTGCGGCGCGCTTCATGACCGGCGACGTCGACACTGATGGAGACGACGCCGGAGTGCAGGACCCCGAAGCGCGGGCCGATCAGTCTCCGGACGGAGAACGGCGCCCGCGTCGTCGCGGACGACGTGGCGGTCGTCGGCGCCGCGGTGGTGCCGGCACAGGCCTCGCCGGCTCGATTTCCGACGAACTCGGTCCGACCTCGACCCCGGAAGTCATGGAAGCCGTCGCAGACTTCGACTCGGCACCGATCGCCCCTGAGCCGCAGGCCGCTTCGCCCGATATCGAGGCTCAGCCGCAGAATCCTGCGGAACAGCCGGACGTCGCGAGCCCTCCGGATGACGCCAAGGATCAGGCCATACCAGAATCCGAAAAAGCCGGTCGCCGGCGCTCGACGGTGCGCGAGAAAGTGAGTTTCACTTCGGATGAGGCGCCGCCGGTAGCGCCTACGATTCAAAGCCAGCCGGAAGAAACTTCACCCGAGCAGCAACAGCCTCCGGAAGCATCGAACGAAGATCGTCCGCGCCGTGCGGGATGGTGGTCGCGCCGGTTCGGCAGCGGCACCTGA
PROTEIN sequence
Length: 340
MKGATHNLIVRTRTNVALYVLNQKRGHLRDLEHSFKVGLSVVADPAIAGQQSFIIDRGEQVHTLEAAKAVLAAQLAAVPSQAEEIHEDEQPLDIEAETGETEARADEQTASEEGDGRKRKRRRSRRERSVEIRDDQAVPDDDTDNVLIPADFAAARFMTGDVDTDGDDAGVQDPEARADQSPDGERRPRRRGRRGGRRRRGGAGTGLAGSISDELGPTSTPEVMEAVADFDSAPIAPEPQAASPDIEAQPQNPAEQPDVASPPDDAKDQAIPESEKAGRRRSTVREKVSFTSDEAPPVAPTIQSQPEETSPEQQQPPEASNEDRPRRAGWWSRRFGSGT*