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SCNpilot_cont_500_bf_scaffold_3248_28

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_12_partial

partial RP 22 / 55 MC: 1 BSCG 23 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 31216..32169

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 317.0
  • Bit_score: 592
  • Evalue 4.40e-166
tRNA-dihydrouridine synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM98_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 317.0
  • Bit_score: 592
  • Evalue 3.10e-166
dihydrouridine synthase TIM-barrel protein nifR3 similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 317.0
  • Bit_score: 592
  • Evalue 9.90e-167

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGTCGGGCATTACCGACCGGCCGTTTCGACGTCTTGCGGAATCGCTCGGAGCGGGCCTCGTCGTCTCCGAGATGACCGCCAGCGACGATCTCGTTCGCGGGCGCCCCATGTCTGTGCTCCGCTGCGAAGCAACCGGCGGCGGACCGCACGTCGTTCAGCTCGCGGGCTGCGAGACGCACTGGATGGCGGAAGGCGCGCGGATCGCCGAGGCGGCGGGCGCCGATATCATCGACATCAACATGGGTTGTCCCGCCCGCCACGTAACAGGCGGCCAGTCGGGTTCGGCGCTGATGCGCGATCTCGATCATGCCTTGCGGTTGATCGAGGCGACGGTCGGCGCTGTGAAAGTGCCGGTCACGCTCAAGATGCGGCTCGGGTGGGACGATCGCTCGCTCAATGCGCCGGCGCTCGCACACCGCGCCGAATCCGCCGGCGTGCAGATGATTACGGTTCACGGCCGCACGCGGTGCCAGTTCTACAAGGGTTGCGCCGACTGGCAGGCGGTGCGGGCGGTGAAACAGGCGGTTCGCATTCCCGTCGTGGTCAACGGTGACATTACCTCGTTCGAAGCAGCCGTCGCAGCGCTGGAGGAATCGAGCGCCGATGCCGTGATGGTGGGGCGCGGCGCGCAGGGCCAGCCATGGATGCCGGGCCAGATCGGACGCCGGCTCGAAACAGGTATCGCCGAACCGCAGCCGTCGCTCGCCAACCAGTTGGCGTATATCCGCGCGCTTTATGACGATCTGCTTCGGCACTACGGCCTTCGCATCGGGCTTCGTCATGCGCGAAAACATCTCGGCTGGGCGCTCGGGATCGCGGCCGCAAGTGGAAACGTTTCCACATCCGTCCTCAAGACGTGGCGCGGAAAAATTTTAACGGCCGACGATCCGGCTGGCGTGCAACGCTCTCTTGTGGATGCATTCGAGGATTTTGCATGGAGCGCCGCAGCATGA
PROTEIN sequence
Length: 318
MSGITDRPFRRLAESLGAGLVVSEMTASDDLVRGRPMSVLRCEATGGGPHVVQLAGCETHWMAEGARIAEAAGADIIDINMGCPARHVTGGQSGSALMRDLDHALRLIEATVGAVKVPVTLKMRLGWDDRSLNAPALAHRAESAGVQMITVHGRTRCQFYKGCADWQAVRAVKQAVRIPVVVNGDITSFEAAVAALEESSADAVMVGRGAQGQPWMPGQIGRRLETGIAEPQPSLANQLAYIRALYDDLLRHYGLRIGLRHARKHLGWALGIAAASGNVSTSVLKTWRGKILTADDPAGVQRSLVDAFEDFAWSAAA*