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SCNpilot_cont_500_bf_scaffold_3881_3

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_12_partial

partial RP 22 / 55 MC: 1 BSCG 23 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 1463..2674

Top 3 Functional Annotations

Value Algorithm Source
Site-specific recombinase XerD n=1 Tax=Herbaspirillum sp. YR522 RepID=J2VNC3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 35.5
  • Coverage: 386.0
  • Bit_score: 235
  • Evalue 7.20e-59
Site-specific recombinase XerD {ECO:0000313|EMBL:EJN07612.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.5
  • Coverage: 386.0
  • Bit_score: 235
  • Evalue 1.00e-58
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 389.0
  • Bit_score: 231
  • Evalue 5.60e-58

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Taxonomy

Herbaspirillum sp. YR522 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
ATGAGTACCGCGTTGTCATTAACTAAGTTGCCATCAACATCCGAGCGCACTCCGACCACCCGCGTGAAGCTGACGGAGCAGCGCATAGCGAACCTTGTAAAGCCACGGGTAAGCGTGGCCTACGTTTACGACACCGTCACGCCCTCGCTCGCCGTCCGTGTTGGATCGACGGGCGGCCGCTCGTTTGTAGTCGTCAAGAAAATCAACGGGCACACTCAGCGGATTACGCTGGGTCGTTACCCCGGTCTTAGACTTGACGATGCGCGTCAGGCCGCACGAACAATTGCCGGTGAAATCGCCAAAGGTAACGACCCTGTCGCATTGCGGAAGGCCGCGCGTGCCCGGAAGACCAAACTTTCCGATCTGTGGCCCTCATATCTCTCTCATTTGAAACAGCGCAATCGGACTTGGCGCCGAGACAAGCAGCGCTGGGAGACCGAAGTGAGCCCAGCTCTTGGCAAGAAGGCTCTGGCGGAGATTTCCCGCACCGATTGCCAGGGCCTGATCGATCGGATTGGAGCCGACCGCCCGATTGCCGCCAATCGCGTTGCCGCATTTTTATCGGCTCTTCTAAACTTTGCTGTTCGATCAGACCGGCTGGCCGTCAATCCGGCTAAGGGTCTGATGCGGTTCCAGGAAACATCGCGGTCCCGCATTCTGAAATCCGATGAACTCGAAAACCTCATTAGCTCAATCGAGACCGAGGGAGAGCCTTGGGCGAGTGTCTTTCTGATGCTGCTGTTTACTGGAGCTCGTCGGGGAAGCGTCCTTGGCATGCGTTGGGAGGATATCGACCTCGGGGCTGCGAATTGGACCATACCGGCGCAAGTCGCAAAAAACAAAACCGCAACCCCCATTCCGCTCACGACACCAGCCGTCAAGCTGCTTCAACAGCGGCTAGATCACTCCGCTGGCGAGCCATGGGTTTTTCCGAGTCCGGTCGGCTCCCGTCATCTCATTGGCTTGACAAAAGCGTGGATGCGGGTACTCCGCCGAGCGGGCATCCAGGACCTTCGCATCCACGACCTGCGGCGCTCAGTCGGGACGGCGCTTGCGCGCGCTGGCGCAAGTCCGCACATCATCGCGACCGGGCTGGGACACCGCAGCATCGCGTCGGCAAGGACTTATGTGCGACTGGCGGGAGAAGACGCACGCCAAGCATTGAACGATGCGGTGGCCTCTCTAACCGCCCGTGGTTCCAACAATGCGTAA
PROTEIN sequence
Length: 404
MSTALSLTKLPSTSERTPTTRVKLTEQRIANLVKPRVSVAYVYDTVTPSLAVRVGSTGGRSFVVVKKINGHTQRITLGRYPGLRLDDARQAARTIAGEIAKGNDPVALRKAARARKTKLSDLWPSYLSHLKQRNRTWRRDKQRWETEVSPALGKKALAEISRTDCQGLIDRIGADRPIAANRVAAFLSALLNFAVRSDRLAVNPAKGLMRFQETSRSRILKSDELENLISSIETEGEPWASVFLMLLFTGARRGSVLGMRWEDIDLGAANWTIPAQVAKNKTATPIPLTTPAVKLLQQRLDHSAGEPWVFPSPVGSRHLIGLTKAWMRVLRRAGIQDLRIHDLRRSVGTALARAGASPHIIATGLGHRSIASARTYVRLAGEDARQALNDAVASLTARGSNNA*