ggKbase home page

SCNpilot_cont_500_bf_scaffold_15092_6

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_12_partial

partial RP 22 / 55 MC: 1 BSCG 23 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(4089..5576)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000313|EMBL:EAQ37466.1}; EC=6.5.1.1 {ECO:0000313|EMBL:EAQ37466.1};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 531.0
  • Bit_score: 789
  • Evalue 2.90e-225
ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1] similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 519.0
  • Bit_score: 779
  • Evalue 6.80e-223
DNA ligase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WRC7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 531.0
  • Bit_score: 789
  • Evalue 2.10e-225

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrobacter sp. Nb-311A → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1488
TTGTCGTTCAAGCACGCCAAGCCCGCTCTTGTCCGTGGTCTGATCGCCGCGCGCGCCGACCCGGTGTTGTTCGCCTTGTCCTACGATTACGTCGGCGATCTCTCCGAAACGGTGGCGCTGATGTGGCCCTCGGCGCTGATGCGCGAGCACGACGGCAAACCGCCGCCGCCCACGCTCACCGATGTCGTCACCACGCTGCGCACCCTCGGCAAGGCCGAACTGCCGGCGCAGCTCGCCCGCTGGCTCGACGAGTTGGACGAAATCGGTCGCTGGGCGCTCTTGAAACTCGTCACCGGCGCGATGCGGATCGGCGTGTCCGCGCGGCTCGCCAAGACCGCCGCGGCGGCGCTCGGCGATAAAGATACGCACGATGTCGAACTGATCTGGCCAGGTCTCGCGCCGCCATATCTCGATCTGTTCGCATGGCTCGAAGGCCGCGCCGAAAAACCGGTCAACCGCATCCCCGCGCCGTTCCGGCCGGTGATGCTGGCGCACGCGATCGAGGACGCCGACTTTGCGCGGCTGGATGCATCCGATTTCACGGCCGAGTGGAAATGGGACGGCATCCGCGTGCAGGCCGTCGGCGGCTGCGACGAGCATGGCAACGACGCGAGCCGGCTTTATTCGCGCACCGGCGAGGACATCACGAGCGGCTTTCCGGATTTGCTGCCCTCGCTGAGGTTGCAGGAATCTTCAGAAGTGACACTTGATGATTCCCGAAAACCGCTTCGCACTTTTCGGCATCAAGCGTTCGCCATCGACGGCGAGTTGCTGGTGGTGCGCGAGGGGCGGGTGCAATCGTTCAACGTCCTGCAGCAGAGGCTGAACCGCAAGACCGTGACGCCCAGGCTGATGAAGGAATTCATCGCAGCGCTTGACGATCCGCGTATCGACCTGTCGCCGCAGGTGCCCTTCGCCACATGGGGCGAACTCGCGGCAGCCCGCGCCGATCCGGCCGCGGCGGGAACCGACGCCGACGCGGTCGAAGGCATCATGCTGAAGCGCCGTGACGCGCCGTATCTGCCGGGACGTCCCAAGGGCCTGTGGTGGAAATGGAAACGCGATCCGCATGTCATCGACGCGGTGTTGATGTACGCGCAGCGCGGCCACGGCAAGCGCTCCTCCTATTACTCCGACTATACCTTCGGAGTCTGGACCGAGGCCGATGGAAACGAGCAACTGGTGCCGGTCGGCAAGGCCTATTTCGGCTTCACCGACGAGGAACTGCTGCGGATCGATCGCTTCGTCCGTCGCAACACCACCGAGAGCTTCGGCCCGGTGCGCCACGTCGTGCATGAGCCGGATCGGGGGCTGGTGCTGGAAGTCGCCTTCGAGGGATTGCAGCGGTCGGCACGGCACAGGTCGGGCGTGGCGATGCGCTTTCCCCGCATCAGCCGCCTGCGCTGGGACAAGCCGCCGCGCGAAGCCGACCGGCTGGAGACGCTGGAGCGGATGCTCGCTTCCGCTGCAGCGGCTCGATCCGCATGA
PROTEIN sequence
Length: 496
LSFKHAKPALVRGLIAARADPVLFALSYDYVGDLSETVALMWPSALMREHDGKPPPPTLTDVVTTLRTLGKAELPAQLARWLDELDEIGRWALLKLVTGAMRIGVSARLAKTAAAALGDKDTHDVELIWPGLAPPYLDLFAWLEGRAEKPVNRIPAPFRPVMLAHAIEDADFARLDASDFTAEWKWDGIRVQAVGGCDEHGNDASRLYSRTGEDITSGFPDLLPSLRLQESSEVTLDDSRKPLRTFRHQAFAIDGELLVVREGRVQSFNVLQQRLNRKTVTPRLMKEFIAALDDPRIDLSPQVPFATWGELAAARADPAAAGTDADAVEGIMLKRRDAPYLPGRPKGLWWKWKRDPHVIDAVLMYAQRGHGKRSSYYSDYTFGVWTEADGNEQLVPVGKAYFGFTDEELLRIDRFVRRNTTESFGPVRHVVHEPDRGLVLEVAFEGLQRSARHRSGVAMRFPRISRLRWDKPPREADRLETLERMLASAAAARSA*