ggKbase home page

SCNpilot_cont_500_bf_scaffold_4136_5

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 35 / 55 BSCG 37 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 2788..3306

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SPR6_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 184.0
  • Bit_score: 257
  • Evalue 7.60e-66
triple helix repeat-containing collagen similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 184.0
  • Bit_score: 257
  • Evalue 2.40e-66
Collagen triple helix repeat protein {ECO:0000313|EMBL:ABA05725.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 184.0
  • Bit_score: 257
  • Evalue 1.10e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrobacter winogradskyi → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
GTGGCAGTTCAAACGCGCGGCAAGCAGGGACCGCAGGGGATTCCCGGCATTCAAGGACCGCCGGGACGCCCCGGTGTGCAAGGCAAACCGGGAGCGCGTGGCGCGCCTGGAAAACCTGGTCCGGCCGGAAAACCAGGACCGCAGGGCAAGGCCGGTCCTGACGGCAAACCCGGAGCGGACGGCAAGGCGGGACGCGACGGCAGGCCGGGTGTGGATGGTAAGCCGGGTGTAGACGGCAAGTCAGGACCGCAGGGGCCGCGCGGCGAACAAGGACCACCCGGGCGGCTGCCGTCGATTGAGGAGGTGCTGCCCTGGATCGAACGGATCGTCGAAGCCTGGGGCGAGTATCAGCGGCGGCAAACCATTGAGGCCGAGCATCGGCTGCTCGCCGAGCACCAGCGCATCGAGGCCGAGCGTGCACTCGCCGAGACCTTGCAAGACAACGACACAGACGATGGGGGACGGAAAAAGAAGAAGAAAGACAAACGCCATCGGCGAAAGGACACCGATGGCGAATAA
PROTEIN sequence
Length: 173
VAVQTRGKQGPQGIPGIQGPPGRPGVQGKPGARGAPGKPGPAGKPGPQGKAGPDGKPGADGKAGRDGRPGVDGKPGVDGKSGPQGPRGEQGPPGRLPSIEEVLPWIERIVEAWGEYQRRQTIEAEHRLLAEHQRIEAERALAETLQDNDTDDGGRKKKKKDKRHRRKDTDGE*