ggKbase home page

SCNpilot_cont_500_bf_scaffold_4624_6

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 35 / 55 BSCG 37 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(3811..4548)

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 245.0
  • Bit_score: 472
  • Evalue 8.80e-131
tRNA pseudouridine synthase A {ECO:0000255|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000255|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000255|HAMAP-Rule:MF_00171}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 245.0
  • Bit_score: 472
  • Evalue 3.90e-130
tRNA pseudouridine synthase A n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=TRUA_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 245.0
  • Bit_score: 472
  • Evalue 2.80e-130

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGCCCCGCTACAAGCTCACCATCGAATATGACGGCGGTCCGTTCTGCGGCTGGCAGTATCAGGACAACGGTCCTTCGGTGCAGGGCGCGCTGGAAGCGGCGGTGAAGGCGATCTGCGGCAACGACGTGCGCGTGCATGGCGCCGGCCGCACCGATGCCGGCGTTCATGCGCTGGCGCAGGTGGCGCATTGCAACATCGCCAAGCACTTCGCGCCGAACCGGCTGCGCGACGGGCTGAACGCCCATCTGCGCCCGCATCCGATCGGGGTGCTCGAAGCCGAGATCGTGCCCGACAGCTTCGAGGCGCGCTTCTCGGCGCTCAGGCGGCATTACGTCTATCGCATCGCCAATCGGCGCGCGAACCTTGCCGTCGAGGTCGGCCGCGTCTGGCGCGTGGCCCGGCCGCTCGATGCGGGGGCGATGCATATTGCGGCGCAGCGGCTGATCGGCAAGCACGACTTCACGACGTTTCGCGACACCGAATGCCAGGCTAAATCGCCGGAGAAGACGCTCGACCAGCTCGACGTCGTCAGGAACGGCGACAACGTCGCCATCATCACCTCGGCGCGCTCGTTCCTGCACAGCCAGGTGCGCTCGATGGTGGGATCACTGGTGTGGGTCGGGCATGGCCGCTGGAGCGCCGACGACCTCGCCCGCGCGCTGGCCGCGCGCCGCCGCGAGGCCTGCGGTCCCGTCGCCCCGCCCGACGGGCTATATCTGGTGCGGGTGGATTATTAG
PROTEIN sequence
Length: 246
MPRYKLTIEYDGGPFCGWQYQDNGPSVQGALEAAVKAICGNDVRVHGAGRTDAGVHALAQVAHCNIAKHFAPNRLRDGLNAHLRPHPIGVLEAEIVPDSFEARFSALRRHYVYRIANRRANLAVEVGRVWRVARPLDAGAMHIAAQRLIGKHDFTTFRDTECQAKSPEKTLDQLDVVRNGDNVAIITSARSFLHSQVRSMVGSLVWVGHGRWSADDLARALAARRREACGPVAPPDGLYLVRVDY*