ggKbase home page

SCNpilot_cont_500_bf_scaffold_4624_8

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 35 / 55 BSCG 37 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(5519..6046)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 175.0
  • Bit_score: 338
  • Evalue 4.90e-90
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 175.0
  • Bit_score: 328
  • Evalue 1.50e-87
  • rbh
Peptide deformylase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WQZ9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 175.0
  • Bit_score: 338
  • Evalue 3.50e-90

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrobacter sp. Nb-311A → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGGCCATTCGCGAAATAATCATTCTGCCGGACAAGCAGTTGCGCCTTGTTTCCAGGCCGATCGAAAAAGTCACGCCGGAAATCCGCAAGCTCGCCGACGACATGTTCGAGACCATGTACGACGCGCCGGGCATCGGGCTGGCCGGCATCCAGATCGCGCAACCCGTCCGCATCATCACCATGGACCTCGCCAGGCGGGACGAAGACGGCGAACTTAACCCGCGACCGCGCGTCTTCATCAACCCGGAAATCCTCTCGGCGTCCGAGGAACTCTCGGTTTATGAAGAGGGCTGCCTGTCGATCCCCGAATATTACGAGGAGGTTGAACGGCCGGCGCGGGTGCGGATCCGCTTCACCGACCTCGATGGCAACGTGCACGAGGAGGATGCCGAAGGCATTTTCGCCACCTGCATCCAGCACGAGATCGATCATCTCAACGGTGTGCTGTTCGTCGATTATCTCTCCAAGCTCAAACGCGACCGCGTGTTGAAGAAGTTCACCAAGGCTGCGAAGCTCGCCGGAAAATAG
PROTEIN sequence
Length: 176
MAIREIIILPDKQLRLVSRPIEKVTPEIRKLADDMFETMYDAPGIGLAGIQIAQPVRIITMDLARRDEDGELNPRPRVFINPEILSASEELSVYEEGCLSIPEYYEEVERPARVRIRFTDLDGNVHEEDAEGIFATCIQHEIDHLNGVLFVDYLSKLKRDRVLKKFTKAAKLAGK*