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SCNpilot_cont_500_bf_scaffold_14433_4

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 35 / 55 BSCG 37 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 1602..2084

Top 3 Functional Annotations

Value Algorithm Source
rRNA large subunit methyltransferase; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 160.0
  • Bit_score: 286
  • Evalue 5.90e-75
Ribosomal RNA large subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000255|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000255|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000255|HAMAP-Rule:MF_00658}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamb similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 160.0
  • Bit_score: 286
  • Evalue 2.60e-74
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RLMH_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 160.0
  • Bit_score: 286
  • Evalue 1.90e-74

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGCGACTCGCCGTCATTGCCATTGGCCGTCTCAAGCAGGGTCCGGAGCGGGAGCTTTCCGACCGCTACCGCGGACGCTTCGATGACATTGGCCGCAGGCTGGGATTTCGCGGCCTCGACGTCCATGAAATTCCGGAAAGTCGCGCCCGCGATTCCGAACAACGCATTCGCGAAGAGGCTGCTTCGATTCTCGCCTTGATCCCGCAGGAAGCGCTTCTGGTGGCGCTGGATGAAAGAGGCAAGAACATCGACAGCGCCGCGTTTGCGGCTCATCTCGGCCGCTGGCGGGATGAGTCGGTGGCGAACACGGTTTTTGTTGTGGGCGGTGCGGACGGACTTTCGCCCGAATTGCGGCGCAGGGTTAAGCTGAGCGTTGCGTTCGGCGCGGTCACCTGGCCGCATCAGATCGTGCGCGTGATGTTGCTGGAGCAGATCTACCGGGCCGCGACCATCCTGGCCGGCCATCCTTATCACCGCGGCTAG
PROTEIN sequence
Length: 161
MRLAVIAIGRLKQGPERELSDRYRGRFDDIGRRLGFRGLDVHEIPESRARDSEQRIREEAASILALIPQEALLVALDERGKNIDSAAFAAHLGRWRDESVANTVFVVGGADGLSPELRRRVKLSVAFGAVTWPHQIVRVMLLEQIYRAATILAGHPYHRG*