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SCNpilot_cont_500_bf_scaffold_17420_3

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 35 / 55 BSCG 37 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 1262..1636

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S5 n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000347A542 similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 124.0
  • Bit_score: 235
  • Evalue 2.20e-59
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 similarity KEGG
DB: KEGG
  • Identity: 96.8
  • Coverage: 124.0
  • Bit_score: 235
  • Evalue 7.10e-60
30S ribosomal protein S5 {ECO:0000255|HAMAP-Rule:MF_01307}; RRP-S5; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 124.0
  • Bit_score: 235
  • Evalue 3.10e-59

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
GTGCCGGAGGCGATCCGCAAGGCGACGGAATCGGCCAAGCGCAATCTGACGCGCGTGGCTCTGCGCGAGGGTCGGACGCTGCATCACGACATCGCGGGGCGTCATGGCGCCGGCCGCGTCTACCTGCGCGCCGCGCCGGCCGGCACCGGGATCATCGCCGGCGGCCCGATGCGCGCCGTGTTCGAGACGCTCGGCATTCAGGACGTGGTTGCGAAGTCGGTCGGCTCGTCCAATCCCTACAACATGGTTCGCGCGACCTTCGACGCGCTGAAGCATCTGGATTCGCCGCGCTCGGTCGCCGCCCGCCGCAACATCAAGGTTTCCACCCTGCAGGCGCGCCGGGTCGGCGGCGACGTCGAAGCGGTTGCCGAATAA
PROTEIN sequence
Length: 125
VPEAIRKATESAKRNLTRVALREGRTLHHDIAGRHGAGRVYLRAAPAGTGIIAGGPMRAVFETLGIQDVVAKSVGSSNPYNMVRATFDALKHLDSPRSVAARRNIKVSTLQARRVGGDVEAVAE*