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SCNpilot_cont_500_bf_scaffold_17420_10

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 35 / 55 BSCG 37 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 5958..6911

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 343.0
  • Bit_score: 537
  • Evalue 1.30e-149
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 339.0
  • Bit_score: 528
  • Evalue 1.30e-147
DNA-directed RNA polymerase subunit alpha n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVU4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 343.0
  • Bit_score: 537
  • Evalue 9.20e-150

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Taxonomy

Nitrobacter sp. Nb-311A → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGGGTGATACAGTGACGATCCAGAAAAATTGGCAAGAGCTCATTCGGCCGAGCAAGCTGCAGGTCGTTCCAGGCAGCGATCCCTCCCGCTTCGCGACCCTGATCGCGGAGCCGCTCGAACGCGGCTTCGGCCAAACGCTCGGTAACGCGCTGCGGCGCATCCTGCTGTCGTCACTGCAGGGCGCCGCGGTACAGTCGGTGCACATCGACGGCGTGCTGCACGAGTTCTCCTCGATCGCGGGCGTTCGCGAGGACGTCACCGACATCGTGCCGGTCACCGCGGGCGACATCCAGACCGTCGGCGACATCGTGGTGCTCAACCCCGAGCTTCAGATCTGCACCCTCGACGACGGCGCCGAAATCCGCATGGAATTCACCGTTGCTGCCGGCAAGGGTTACGTCGCCGCCGAGCGCAACCGGCCCGAGGACGCACCGATCGGACTGATCCCGGTCGACAGTCTGTATTCGCCGGTGCGCAAGGTGTCCTACAAGGTCGAGAACACCCGCGAGGGCCAGATCCTCGACTACGACAAGTTGACGATGACGATCGAGACCAACGGCGGCGTGACGCCGGAGGACGCCGTGGCTTTCGCCGCGCGCATCCTGCAGGATCAGCTCAACGTCTTCGTGAATTTCGAGGAGCCGCGCAAGGAGGTCTCCGCCGAGATCATTCCCGATCTGGCGTTCAACCCGGCCTTCCTCAAGAAGGTCGATGAGCTGGAACTGTCGGTGCGCTCGGCCAACTGCCTGAAGAACGACAACATCGTCTACATTGGCGACCTGGTGCAGAAGTCGGAAGCGGAGATGCTGCGCACGCCGAACTTCGGCCGCAAGTCGCTGAACGAAATCAAGGAAGTGCTGGCCCAGATGGGTCTCCATCTCGGCATGGAAGTTCCGGGCTGGCCGCCTGAGAATATCGACGAACTGGCCAAGCGCTTCGAGGATCATTACTGA
PROTEIN sequence
Length: 318
MGDTVTIQKNWQELIRPSKLQVVPGSDPSRFATLIAEPLERGFGQTLGNALRRILLSSLQGAAVQSVHIDGVLHEFSSIAGVREDVTDIVPVTAGDIQTVGDIVVLNPELQICTLDDGAEIRMEFTVAAGKGYVAAERNRPEDAPIGLIPVDSLYSPVRKVSYKVENTREGQILDYDKLTMTIETNGGVTPEDAVAFAARILQDQLNVFVNFEEPRKEVSAEIIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPNFGRKSLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY*