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SCNpilot_cont_500_bf_scaffold_621_28

Organism: SCNPILOT_CONT_500_P_Leifsonia_70_8_8

partial RP 35 / 55 MC: 1 BSCG 36 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 28864..29553

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Streptomyces violaceusniger Tu 4113 PF13_STRVO">RepID=G2PF13_STRVO similarity UNIREF
DB: UNIREF100
  • Identity: 42.0
  • Coverage: 219.0
  • Bit_score: 160
  • Evalue 2.90e-36
Leucobacter komagatae strain VKM ST2845 L_komagatae_03, whole genome shotgun sequence {ECO:0000313|EMBL:KIP53433.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 209.0
  • Bit_score: 205
  • Evalue 6.40e-50
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.0
  • Coverage: 219.0
  • Bit_score: 160
  • Evalue 9.10e-37

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Taxonomy

Leucobacter komagatae → Leucobacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGGAAGCCTCCCCCGGCGAGACCGCGGCGCCCCGCCCGCGCGGCCGCGAGCGTGAGGCCCGGGCGAACGACACCTCGGTGCTCGAAGCGGCGCGCGACGTCTTCGCCGAGCAGGGCTACAACGCCCCGATGTCCGCCGTGGCGGAACGCGCGGGCGTCGGCGTCGCCAGCATCTACCGGCGCTACCCGAGCAAGGACGCGCTGGTGCACGGCCTCCGCCTGCTCGCCCTGCAGCAGGTGACCGATCTCGCCGTCACGTCGGCGCGTGCCACGCCCGGCTCGGCGATCCGGACCTTCCTGGAGACCCACCTCCAGGAGGCGGCCAATCCGCTGGTCACCACCTTCGGCCGCCACGTGGGCTCGAGCCCCGACATCGACGCCGCCGCCGACCGCCTGCTGCTCGCGCTGGAGGCCCTCATCGCGGCGGATGCCAGCACGGGAGCCGTCCCCGCAGACTTCGGCCCGGGCGAGCTGATGGCGACGCTGGTGCATCTGCGTCCCGCCCTCCCGACGACGCGGGAGCGCTCCATCCAGATCCACCTGCGCCACCTCGACGTCTACCTGCTGGGGCTGCGGGAGGCCGCTGCGGACCCCGCGCGCCAGCGCGGCGAACCGATGACCTGGGCCGAGTGGCTGGCCCTCAACAGCGCGGGACGGCCGGACGATGTCGGAGGGTCCCCGGTAGACTAG
PROTEIN sequence
Length: 230
MEASPGETAAPRPRGREREARANDTSVLEAARDVFAEQGYNAPMSAVAERAGVGVASIYRRYPSKDALVHGLRLLALQQVTDLAVTSARATPGSAIRTFLETHLQEAANPLVTTFGRHVGSSPDIDAAADRLLLALEALIAADASTGAVPADFGPGELMATLVHLRPALPTTRERSIQIHLRHLDVYLLGLREAAADPARQRGEPMTWAEWLALNSAGRPDDVGGSPVD*