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SCNpilot_cont_500_bf_scaffold_625_35

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_65_15

near complete RP 49 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(35513..36025)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, HxlR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D348_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 168.0
  • Bit_score: 263
  • Evalue 1.40e-67
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EYR83164.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 168.0
  • Bit_score: 263
  • Evalue 1.90e-67
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 160.0
  • Bit_score: 236
  • Evalue 5.70e-60

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGCGCGAGACCGGCCGTTCGGGCTGCCCGATCAACCTGACATTGGAAATCCTGGGAGATCGCTGGAGCCTGATCGTCCTGCGCGACATCATGTTCGGCAACCGCCGGCATTTCCGCGAGTTGCTGGCGAAGTCCGACGAGGGCATCGCCTCGAACATCCTCGCCGACCGGCTGAAGCGGCTGGTCGAGCGGGGGCTGCTCTCGCGCCGCGACGACGCCACCCACAAGCAGAAGGCGATCTACAGCCTGACCGAGATGGGCATCGCGCTCGTTCCCGTCTTCGCCGCCATGGGCGACTGGGGCCGCCGCTTCCTCCCCGTCACCGAGGATCTGTCGATCCGCGCCGAGCTTCTCGCCGAAGGCGGCCCGGCGCTCTGGGAGCGCTTCATGCAGGAGCTGCGACACCTGCATCTCGATGCGCCGGCGCCGGAGCGATCGGTGCTCGACGAGCTGACGGCGGCCTATCGCGCCGCCGTCGCCCGCAAGCAGCTTGGGGCCGAGGCTTCCGCCTGA
PROTEIN sequence
Length: 171
MRETGRSGCPINLTLEILGDRWSLIVLRDIMFGNRRHFRELLAKSDEGIASNILADRLKRLVERGLLSRRDDATHKQKAIYSLTEMGIALVPVFAAMGDWGRRFLPVTEDLSIRAELLAEGGPALWERFMQELRHLHLDAPAPERSVLDELTAAYRAAVARKQLGAEASA*