ggKbase home page

SCNpilot_cont_500_bf_scaffold_1708_13

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 49 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 14113..15261

Top 3 Functional Annotations

Value Algorithm Source
Macrolide-specific efflux protein MacA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DX86_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 378.0
  • Bit_score: 547
  • Evalue 1.40e-152
  • rbh
RND transporter {ECO:0000313|EMBL:KIO49397.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 378.0
  • Bit_score: 551
  • Evalue 7.90e-154
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 380.0
  • Bit_score: 456
  • Evalue 7.80e-126
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1149
ATGATTCGACCCTTTCGCCGCATCCGGCTATTCATCATTTTGACAACGTTGCTGCTGAGCGGGTGGATTTGGTACTGGCAATCCGGATCAGACTCGCAGCAGGGTCGATATAAAACTCAGACGATTGACCGTGGCGACATTCTTCAGAGCATTTCCGCCAATGGCACGCTCAATCCTGTAGTCCTGGTGAATGTAGGTACACAGGTGTCCGGCACCGTATACCGCCTTCATGCAGACTTCAACGATAGAGTGAAGGCGGGCGATATGCTGGCGGAACTTGATCCGGCACTTTTTCAGGCTCAACTGCGGCAATCGGAAGCAAATGTCGCCAATGACCATGTTGCGTTAAAGCTGGCCCAGAGAAGAATGGCGCGCAACCGCGCGCTGGTGGAGAAAGGCTTCATTTCCGGGGACGCGCTGGATGCGGTCGAACAACAACTGGAGGTTGCGCGCGCCCAGTTGGCCGTGGATAACGCGCAACTTGCCCGGGATCGTACCAACCTCAATTACAGCGTTATACGCTCCCCGATTTCGGGCATAGTGATAGCGCGCAACGTGGATGTGGGCCAGACCGTGGCGGCAAGTTTCCAGACACCCACGCTATTTCAGATCGCCAATGATCTGCGTCAGATGCAGATCGATACCAGTGTCGCGGAAGCCGATATCGGCCAACTGCATCTCCACCAGGTGGTGCATTTCACTGTGGATGCGTTCCAGGAACGGGAATTTGCAGGGGTGGTAAAGCAGCTACGGCTTAATCCCACCATTCAGCAGAATGTCGTTTCGTATAACGTCGTGGTTGCAGTAGCCAACGATGATGAAACCTTGCTGCCCGGCATGACCGCCAATGTACGATTCACGGTGGAGCAAAAACAAAACGTATTGCGCGTGCCCAACGCAGCGCTGCGCTACAAACCGGCCGAAACAGACGTCGATCCAACTTCGGCAAGCAAGCCAATCGAAGGCAAGCGCCTGCTTTATCGACTCGAGGGAAGCCATCGTGTTCCCGTGTATGTCAAGACAGGGATTGCCGATAATAACTTCACCGAAATTGTCGAAGGAGATATCAAGGAAGGCGATGAATTGATAATTCGTGAAATGGGCGATAAGGACAAGTCCGGCAGCAAATTCAGATTCAGAATGTTTTAA
PROTEIN sequence
Length: 383
MIRPFRRIRLFIILTTLLLSGWIWYWQSGSDSQQGRYKTQTIDRGDILQSISANGTLNPVVLVNVGTQVSGTVYRLHADFNDRVKAGDMLAELDPALFQAQLRQSEANVANDHVALKLAQRRMARNRALVEKGFISGDALDAVEQQLEVARAQLAVDNAQLARDRTNLNYSVIRSPISGIVIARNVDVGQTVAASFQTPTLFQIANDLRQMQIDTSVAEADIGQLHLHQVVHFTVDAFQEREFAGVVKQLRLNPTIQQNVVSYNVVVAVANDDETLLPGMTANVRFTVEQKQNVLRVPNAALRYKPAETDVDPTSASKPIEGKRLLYRLEGSHRVPVYVKTGIADNNFTEIVEGDIKEGDELIIREMGDKDKSGSKFRFRMF*