ggKbase home page

SCNpilot_cont_500_bf_scaffold_16031_1

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 49 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 1..810

Top 3 Functional Annotations

Value Algorithm Source
FIG004655: Polysaccharide deacetylase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLF2_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 269.0
  • Bit_score: 487
  • Evalue 1.20e-134
  • rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:KIO49383.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 269.0
  • Bit_score: 492
  • Evalue 3.10e-136
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 269.0
  • Bit_score: 458
  • Evalue 1.40e-126
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATAGACGTGGAAGATTACTTCCAGGTTTCGGCATTCGCACCCCACATTCCCAGGGAGGCCTGGACAACCATCCCCTGCAGGGTGGAGTCCAACATCGACCGTATCCTGGCGCTATTGAACGAGGAAGGAACGAAGGCAACGTTTTTCACTCTGGGATGGATTGCAGAGCGTTACCCCGCCATGGTAAGGCGCATCGTCACCGAAGGTCACGAGCTTGCCAGCCATGGCTGGGCGCATTACCGGGTAACCGACCAGAAACCGGACGAATTCCGCGAGGATATCTCCCGAAGCAAGGCATTACTGGAAGATATCGGCGGGCAGGCGGTATTGGGTTACCGCGCACCGAGCTTTTCCATCGGGCGGCACAATCAATGGGCGCTAAACGTCCTTGAAGAGGCTGGCTATCGTTACAGCTCGAGCATTTATCCTATCCAGCACGACCATTATGGCATGCCGGACGCGCCCCGCTTTGCTTATCATCCATGCAGCGACAAGGGTTTGCTGGAATTGCCAATCACCACGATGCGCCTGTTCAGGCGGAACCTCCCCGCAGGGGGCGGAGGGTATTTCCGGCTTTGGCCCTATCCCATTTCGCGCTGGTTTTTGCAAAGGTTGAACCGGCTCGAGCGTCGCTCCGCAATCTTTTATTTCCACCCATGGGAAATGGATCACGAGCAGCCCAGGCAAACGGGCATCAGCATGAAAACGCGCTTTCGCCACTACTACAATCTTCATCGCATGGAAGCGCGTATCGCGGCCCTGACCCGGGATTTCAAATGGGATCGAATGGATCGGATTTTCCTGGAATAG
PROTEIN sequence
Length: 270
IDVEDYFQVSAFAPHIPREAWTTIPCRVESNIDRILALLNEEGTKATFFTLGWIAERYPAMVRRIVTEGHELASHGWAHYRVTDQKPDEFREDISRSKALLEDIGGQAVLGYRAPSFSIGRHNQWALNVLEEAGYRYSSSIYPIQHDHYGMPDAPRFAYHPCSDKGLLELPITTMRLFRRNLPAGGGGYFRLWPYPISRWFLQRLNRLERRSAIFYFHPWEMDHEQPRQTGISMKTRFRHYYNLHRMEARIAALTRDFKWDRMDRIFLE*