ggKbase home page

SCNpilot_cont_500_bf_scaffold_6627_17

Organism: SCNPILOT_CONT_300_BF_Plasmid_like_65_34

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(13584..14003)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein H-NS n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUR1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 139.0
  • Bit_score: 116
  • Evalue 2.90e-23
DNA-binding protein H-NS {ECO:0000313|EMBL:EIL90952.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 139.0
  • Bit_score: 116
  • Evalue 4.10e-23
DNA-binding protein H-NS similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 137.0
  • Bit_score: 109
  • Evalue 8.50e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGTCGCGAAACCTGGATGGCATGTCACCCCGTGAGCTCGCCGCGCTCATCAAGCAGGCCGAGGCTCGGCTCGCCGTGTCCCACGCACAGCACATCGATGCGACGCGCAAGAAGATCGAGGCTCTGCTGAAAGCGGCCGACCTGAAGCTCGAGGACGTCTTTCCGCGCTCTACACGCGGTATCGCCAGACGTGCCGGCGCCGGCGTGCCCAAATTCCGGAATCCGCTCGACCCTTCGCAGACCTGGACGGGATTCGGGAAGAAGCCGGCTTGGTTCGTCGCGGCCCTAAAGCGACCTGGCGTGACCGAAGCGACCCTACGCATGTCGTCCGGAGCAATCAGGAAGCCCGCCGACGCGGCGAAGTCATTAAAGCGCGGAAAGGCGCCGGCGAAGCGCGTTCGCCGCCAGCGGAAAGCGTAG
PROTEIN sequence
Length: 140
MSRNLDGMSPRELAALIKQAEARLAVSHAQHIDATRKKIEALLKAADLKLEDVFPRSTRGIARRAGAGVPKFRNPLDPSQTWTGFGKKPAWFVAALKRPGVTEATLRMSSGAIRKPADAAKSLKRGKAPAKRVRRQRKA*