ggKbase home page

SCNpilot_cont_500_bf_scaffold_5385_4

Organism: SCNPILOT_CONT_500_P_Delftia_66_8_1

partial RP 34 / 55 MC: 1 BSCG 33 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 2297..2926

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Delftia acidovorans RepID=S2WIR8_DELAC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 209.0
  • Bit_score: 408
  • Evalue 3.20e-111
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 209.0
  • Bit_score: 408
  • Evalue 4.60e-111
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 209.0
  • Bit_score: 407
  • Evalue 2.30e-111
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Delftia acidovorans → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGACGCCTCCCGAATTCCCGCCTTCTTCTGCCGACAGCGACCTGGCTCTGGTCGAGCGCACCAACGCAGGAGACATGCGGGCCTTCGAGCTGCTGGTCATCAAGTACCAGCGCCGCATCGAGCGCCTCATTGGCCGCATGGTGCGCGACGTGGACCTGGTGCCTGACATTGCGCAGGAAACCTTCATCCGGGCCTATCGGGCGCTGCACCAGTTCCGGGGTGATGCCCAGTTCTACACCTGGCTGTATCGCATCGCCGTGAATACTGCCAAGAAGGCGCTGCTGGACATGAAGCGCTCGCCGCTGATCACCGAAAGCGCGTTACACAACGGGGATGACGATGATGAAACTTCCCGGCTCAGCCAGGAACTAACCACCGAAGAAACACCCGAAACGATCCTGGCGGCCCAGGAGATTGCCCAGGCAGTCAACGCCGCCATGGAGGCCTTGCCCGAAGATCTCCGTCAAGCCGTCACGTTGCGGGAAATCGAAGGCCTGAGCTACGAGGAAATCTCGAACGCCATGGGTTGTCCCATAGGCACCGTGCGTTCACGCATCTTCCGTGCACGCGAAGCGATTTCAGCGAGAGTCAAGCCTTTGCTGGAGCGCCAGTCTGGCAAGCGGTGGTAG
PROTEIN sequence
Length: 210
MTPPEFPPSSADSDLALVERTNAGDMRAFELLVIKYQRRIERLIGRMVRDVDLVPDIAQETFIRAYRALHQFRGDAQFYTWLYRIAVNTAKKALLDMKRSPLITESALHNGDDDDETSRLSQELTTEETPETILAAQEIAQAVNAAMEALPEDLRQAVTLREIEGLSYEEISNAMGCPIGTVRSRIFRAREAISARVKPLLERQSGKRW*