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SCNpilot_cont_500_bf_scaffold_21339_6

Organism: SCNPILOT_CONT_500_P_Delftia_66_8_1

partial RP 34 / 55 MC: 1 BSCG 33 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 4460..4825

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion exporter n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXN4_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 120.0
  • Bit_score: 149
  • Evalue 2.10e-33
Type III secretion exporter {ECO:0000313|EMBL:EZP49866.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 122.0
  • Bit_score: 233
  • Evalue 2.00e-58
type III secretion exporter; K02401 flagellar biosynthetic protein FlhB similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 120.0
  • Bit_score: 149
  • Evalue 6.50e-34

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Taxonomy

Delftia sp. RIT313 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGGCCGAGCAGGATCTGGATCACAATGAGGCGGCCACCCCTTACAAACTGCAAAAGGCCAGGGAAAAGGGTCAGGTCTCCAAGAGTTCCGATGTGGTGTCGGCCCTGGTGTTCACGGTGGCCGTTGCATATCTGTCATGGCAAGGATGGGATATGGCCCTGCGCCAGTTCCGGCTTGACCAGTTGCTGGTGATTCAAAGTTCCATGGCCAGCCCAGGCGCTGAAATGCTGTGGCCCCTGATTGCCGGCATGCTCAAGGAGGCATTGGCCTGGCTGGCGCCTTTCGCTTGCACCGTGATGATTGCCGCGGTGGTCGGCAATGCGATGCAGACGGGGCCGGTTCTCTCGGTGGAGCCCGTGGTTGCC
PROTEIN sequence
Length: 122
MAEQDLDHNEAATPYKLQKAREKGQVSKSSDVVSALVFTVAVAYLSWQGWDMALRQFRLDQLLVIQSSMASPGAEMLWPLIAGMLKEALAWLAPFACTVMIAAVVGNAMQTGPVLSVEPVVA