ggKbase home page

SCNpilot_cont_500_bf_scaffold_31987_2

Organism: SCNPILOT_CONT_500_P_Delftia_66_8_1

partial RP 34 / 55 MC: 1 BSCG 33 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(1306..1869)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding S4 domain-containing protein; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 187.0
  • Bit_score: 375
  • Evalue 8.60e-102
  • rbh
RNA-binding S4 domain protein n=4 Tax=Delftia RepID=A9BUI7_DELAS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 187.0
  • Bit_score: 375
  • Evalue 2.70e-101
  • rbh
RNA-binding S4 domain protein {ECO:0000313|EMBL:ABX34095.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 187.0
  • Bit_score: 375
  • Evalue 3.80e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Delftia acidovorans → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
CCCGAGGCCGTGCCGCCCGTCACCCTGCTGATGAACAAGCCTGCGGGCTATACCCAGGGCCGGCCCTATGGCCGGGTGCGCAGCGCCCACTCCCTGCTGGGCGAAGCCAGCATGGCCCAGGTGGACACGCCCATGCCGCTGCTGGTGCTGGCCCAGCACTTCAAGAACCTGGAATCCTTCCTGCCCCTGCCGCTGCCGGCCAGCGGCCTCATCGTCTACACCCAGGACAAGCGCGTGGCGCGCAAGCTGGGGGAGGAAGGCATGTGGCTGGAGCAGGAATGCATCGTCGGCGTCGAGGGCCAGATCCACGAGGACGGCCTGGAGCTGATGAAGGCCGGCCTGCCGATCGGCAAGCGCCAGCTGCCGCCCTGCCGCGTGAGCTGGCAGAACGAGAACCACCTGCGCTTTGCGCTCAAGGGCATCGCGCCCGACGAGATCGACGCCATGTGCACCGAAGTGGGCCTGCGCGTGGTCAGCCTGCGCCGCCTGCGCATTGGCCGCCTCTCTCTGGCCAAGGTGCCCGAAGGCCAGTGGCGCTACCTGATGCCCTGGGAGCGGTTCTAG
PROTEIN sequence
Length: 188
PEAVPPVTLLMNKPAGYTQGRPYGRVRSAHSLLGEASMAQVDTPMPLLVLAQHFKNLESFLPLPLPASGLIVYTQDKRVARKLGEEGMWLEQECIVGVEGQIHEDGLELMKAGLPIGKRQLPPCRVSWQNENHLRFALKGIAPDEIDAMCTEVGLRVVSLRRLRIGRLSLAKVPEGQWRYLMPWERF*