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SCNpilot_cont_500_bf_scaffold_3612_14

Organism: SCNPILOT_CONT_300_BF_Cytophagia_47_14

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 11 / 38 MC: 4
Location: 11111..11623

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003692B30 similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 170.0
  • Bit_score: 297
  • Evalue 8.60e-78
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 170.0
  • Bit_score: 258
  • Evalue 8.10e-66
hypothetical protein; K09748 ribosome maturation factor RimP similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 170.0
  • Bit_score: 256
  • Evalue 6.90e-66

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Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 513
ATGGACGATAAAGCGAAAGTAACGGAATCGCTCCAGCCTTATTTGGCTGATGGACGATTATATATTGTTGATTGCCAGATAGCTGGGCGGCAGGGGGGGCGAATTAAAGTAACCGTCCTGCTCGATAGCGATGAAGGAATTACGATTGATGAGTGTGCCAATATCAGTCGTACATTAGGCACACAAATGGACGAAATGAATTTTTTTGGTGATTCTCCCTTCACGCTTGAAGTTTCATCGCCGGGAGTCGATTTTCCACTAAGGTTCATGCGTCAGTATCTCCGAAACATTGGTCGTACGCTGGTAGTGACCCTGGCAGATGGGAAAACGCGAAAAGGTAAATTAGTCTCGGTAGCCGACGATCAAATTGTGCTGGATATTGAGCCGGAAAAGAAATCAAAAAGTAAAAAGAAAAAAGAAGCTGATTTAATGGTTGAAGCGGCTCCGGTTGGACCCACCCCAATCCCGTTTGAGCAGATTAAAAAAGCGAATGTAGAGGTATCTTTTAAATAG
PROTEIN sequence
Length: 171
MDDKAKVTESLQPYLADGRLYIVDCQIAGRQGGRIKVTVLLDSDEGITIDECANISRTLGTQMDEMNFFGDSPFTLEVSSPGVDFPLRFMRQYLRNIGRTLVVTLADGKTRKGKLVSVADDQIVLDIEPEKKSKSKKKKEADLMVEAAPVGPTPIPFEQIKKANVEVSFK*