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SCNpilot_cont_500_bf_scaffold_13209_1

Organism: SCNPILOT_CONT_300_BF_Cytophagia_47_14

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 11 / 38 MC: 4
Location: 77..850

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 251.0
  • Bit_score: 399
  • Evalue 2.60e-108
tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 251.0
  • Bit_score: 393
  • Evalue 5.50e-107
  • rbh
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036B6F7A similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 256.0
  • Bit_score: 464
  • Evalue 6.10e-128
  • rbh

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Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 774
ATGCGCTATTTTATTGAACTGTCGTATCGGGGAACGGCCTACTGCGGCTGGCAACCACAGACGGTTGGTGTGAGTATTCAGGCCACGTTGGAAGCTGCACTCAGCCAACGACTGGGCAAACGCGTTTATGTAGTGGGGAGCGGGCGCACAGATGCGGGAGTACATGCCCGGCAGCAATTTGCCCATTTTGATACTAATGAACCGCTAAACTTATCGGAAGCATTTATCTATTCATTGAATTGCCTTCTGCCAGAGGACATTGCCATTCGGGCCATTTTTCCGGTTCAGGAAACGGATCATGCGCGTTTTTCGGCCGTTTTTCGGTATTATCAGTATCACATTTCCCGGCAAAAGGATGTCTTTACGCATGGTCTGTCGTATCACTTCCGTCCCTGGCTCAACGAGACATTAATGAACGAGGCCTGCCAGGGTATGCTGAATTACACGAATTTTCAAAGTTTCAGTAAGGCGAGAGCCAATGTCAATCATTTTCATTGCCGTCTCGATTTTGCCTATTGGGAACGCATAAACGAGGATTGCCTGACGTTTCATATTCGGGCAGACCGATTCCTGTGGGGCATGGTACGTACCATTGTCGGTACGATGCTTGAAATAGGACAGGAGCGGATGGATTGCCATCAGTTCGAGCAGATTATACAGGCGAAAGACCGTAATGCGGCCGGAAGAGCCGTGCCGGCAAATGGCTTATATCTGGTTGAGGTGGGCTACCCGGAAGAGGTGATAACAGGGAGGGAGAATGGGGCAAGGCCATAG
PROTEIN sequence
Length: 258
MRYFIELSYRGTAYCGWQPQTVGVSIQATLEAALSQRLGKRVYVVGSGRTDAGVHARQQFAHFDTNEPLNLSEAFIYSLNCLLPEDIAIRAIFPVQETDHARFSAVFRYYQYHISRQKDVFTHGLSYHFRPWLNETLMNEACQGMLNYTNFQSFSKARANVNHFHCRLDFAYWERINEDCLTFHIRADRFLWGMVRTIVGTMLEIGQERMDCHQFEQIIQAKDRNAAGRAVPANGLYLVEVGYPEEVITGRENGARP*