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SCNpilot_cont_500_bf_scaffold_39098_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

partial RP 33 / 55 MC: 1 BSCG 33 / 51 MC: 3 ASCG 8 / 38
Location: comp(268..1353)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane receptor protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0D0P6_CAUCE similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 364.0
  • Bit_score: 237
  • Evalue 2.90e-59
TonB-dependent receptor {ECO:0000313|EMBL:GAO53600.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 368.0
  • Bit_score: 274
  • Evalue 1.80e-70
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 361.0
  • Bit_score: 212
  • Evalue 2.40e-52

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1086
ATGGGCAGCGATGTCGCCCGTTCCATCTCGACCTCGAGTTTTTCGCTGTTCGGTCAGGCCACCTATCGCGTGACGGATTATTTCCGTCTCATCGGCGGGCTGCGCTGGACGACGGAGAATCTCGACGCGGCCTTCGCACGCACGACCGTTCTCGGCCTTAACGGCCCGTCGGGCCCGAATGTCGGTTTTCAGGGTCAGGGCATCCTGCCGCGCACGCCCATCAAGGCGAACGATTCCAATGTCTCCTACAAGGTCGGCGCGCAATTCGACCTTGCCAAGGACGTGATGGCCTATTTCACTGTTACCAGTGGTTATAAGGGCGCGGCCGTCAATCTGCTCAACAACCTCAGCGCGGCACAGATCGCATCGGGCGATGCGGTTCTGAAACCCGAAACCTCCACCGCCTATGAGGTGGGCCTGCGCTCCGAATTCTGGGATCGGCGCATCGTTGCCAACGTGACCGGCTTCTGGACCAAGTATGATGATTTCCAGGCGCAGTCGTTCGATCCCACACAATTGCTGTTCACGCTGGCGAATGCGGGCGCGTTGCGCACGCGCGGTGTCGAGGCCGACGTGACGGTACAGCCGGTTGCCGGCCTGACACTTTCCGGCAATGCCGCCTATACCGAAGCGACATTCCTGAATTATGTTTCCAATTGCTATCCCGGACAGACGGCGGCACAGGGCTGTGTTGCGACGCCGAAACCACATCAGGATCTTGCGGGCGCAACACTGTCCAACGCGCCGAAATTCGTCTTTACCCTGAATGCCGATTATGATTTCCCGATCGAACAGTTCGACAAGGTCGGCTTTGTTCACCTGACCTATCATCACACCAGTTCCGTTCTCTACAATTCCAATCAGGACCCGAATGCGGTTCAGAAGGCCTATGGCATCCTGAACGCCTCCATCGGGCTGGAGCCGACGGACGGCAGCTATACATTGTCCCTGTATGTGAAGAATCTGCTTGATCAGCGCTATGCCAGCTTTATCAGTGCGAACGGGCTGTTCGCAGGCAGCTATGTGCAAATTCTGCCGCCCGATGCACGCCGCCGGATCGGGGTATCGCTGACGGCAAACTTCTGA
PROTEIN sequence
Length: 362
MGSDVARSISTSSFSLFGQATYRVTDYFRLIGGLRWTTENLDAAFARTTVLGLNGPSGPNVGFQGQGILPRTPIKANDSNVSYKVGAQFDLAKDVMAYFTVTSGYKGAAVNLLNNLSAAQIASGDAVLKPETSTAYEVGLRSEFWDRRIVANVTGFWTKYDDFQAQSFDPTQLLFTLANAGALRTRGVEADVTVQPVAGLTLSGNAAYTEATFLNYVSNCYPGQTAAQGCVATPKPHQDLAGATLSNAPKFVFTLNADYDFPIEQFDKVGFVHLTYHHTSSVLYNSNQDPNAVQKAYGILNASIGLEPTDGSYTLSLYVKNLLDQRYASFISANGLFAGSYVQILPPDARRRIGVSLTANF*