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SCNPILOT_CONT_300_BF_Rhizobiales_62_8

SCNPILOT_CONT_500_BF_Alphaproteobacteria_61_35
In projects: SCNPILOT_CONT_500_BF

Consensus taxonomy: Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 1-50 of 368 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_500_bf_scaffold_23710
Species: Sphingomonas wittichii (100%)
1 2355 bp 55.84 29.94 88.79
SCNpilot_cont_500_bf_scaffold_52679
Species: Parvibaculum lavamentivorans (100%)
1 1253 bp 58.82 29.93 90.26
SCNpilot_cont_500_bf_scaffold_58256
Species: R_Phenylobacterium_69_31 (100%)
1 1151 bp 57.25 24.98 99.83
SCNpilot_cont_500_bf_scaffold_38685
Species: Phaeospirillum fulvum (100%)
1 1607 bp 59.55 30.34 99.88
SCNpilot_cont_500_bf_scaffold_50803
Species: Sphingobium yanoikuyae (100%)
1 1289 bp 59.27 26.96 56.56
SCNpilot_cont_500_bf_scaffold_33577
Species: RBG_16_Alphaproteobacteria_64_48_curated (100%)
1 1800 bp 61.61 31.94 92.17
SCNpilot_cont_500_bf_scaffold_55517
Species: Scytonema millei (100%)
1 1200 bp 64.75 51.67 100.00
SCNpilot_cont_500_bf_scaffold_63101
Species: alpha proteobacterium MA2 (100%)
1 1069 bp 61.55 40.93 99.91
SCNpilot_cont_500_bf_scaffold_31146
Species: Ochrobactrum intermedium (100%)
1 2477 bp 61.24 30.38 96.77
SCNpilot_cont_500_bf_scaffold_65169
Species: alpha proteobacterium MA2 (100%)
1 1034 bp 62.57 43.04 87.62
SCNpilot_cont_500_bf_scaffold_44730
Species: Afipia sp. 1NLS2 (100%)
1 1430 bp 66.50 29.55 99.86
SCNpilot_cont_500_bf_scaffold_42379
Species: Parvibaculum lavamentivorans (100%)
1 1493 bp 63.36 33.82 93.84
SCNpilot_cont_500_bf_scaffold_58295
Species: Bradyrhizobium oligotrophicum (100%)
1 1151 bp 61.42 23.89 92.79
SCNpilot_cont_500_bf_scaffold_59440
Species: Erythrobacter litoralis (100%)
1 1131 bp 61.72 30.95 99.73
SCNpilot_cont_500_bf_scaffold_51732
Species: Methylobacterium sp. 4-46 (100%)
1 1271 bp 62.47 45.63 99.84
SCNpilot_cont_500_bf_scaffold_46081
Species: Acidiphilium multivorum (100%)
1 1396 bp 55.09 32.59 96.06
SCNpilot_cont_500_bf_scaffold_65524
Species: Rhodospirillum centenum (100%)
1 1826 bp 65.06 32.17 99.89
SCNpilot_cont_500_bf_scaffold_60094 1 1120 bp 58.13 17.19 99.64
SCNpilot_cont_500_bf_scaffold_22359
Species: Defluviimonas sp. 20V17 (100%)
1 2465 bp 63.08 27.79 99.92
SCNpilot_cont_500_bf_scaffold_63491
Species: Parvibaculum lavamentivorans (100%)
1 1062 bp 60.45 28.95 70.62
SCNpilot_cont_500_bf_scaffold_54639
Species: Methylobacterium radiotolerans (100%)
1 1217 bp 65.49 42.11 94.41
SCNpilot_cont_500_bf_scaffold_87408
Species: alpha proteobacterium BAL199 (100%)
1 1257 bp 62.21 29.44 99.76
SCNpilot_cont_500_bf_scaffold_67180
Species: R_Sphingopyxis_65_24 (100%)
1 1004 bp 55.78 24.40 99.80
SCNpilot_cont_500_bf_scaffold_57602
Species: Rhodospirillum centenum (100%)
1 1162 bp 69.02 19.58 89.59
SCNpilot_cont_500_bf_scaffold_49266
Species: R_Phenylobacterium_69_31 (100%)
1 1321 bp 58.52 26.68 99.70
SCNpilot_cont_500_bf_scaffold_24682
Species: Parvibaculum lavamentivorans (50%)
2 2286 bp 65.53 39.92 95.41
SCNpilot_cont_500_bf_scaffold_79299
Species: Beijerinckia indica (50%)
2 1604 bp 59.85 29.15 63.78
SCNpilot_cont_500_bf_scaffold_50253
Species: Caulobacter vibrioides (50%)
2 1300 bp 63.15 45.96 89.54
SCNpilot_cont_500_bf_scaffold_61569
Species: Devosia chinhatensis (50%)
2 1094 bp 62.61 26.97 91.32
SCNpilot_cont_500_bf_scaffold_13529
Species: R_Sphingopyxis_65_24 (50%)
2 3576 bp 59.90 34.12 86.91
SCNpilot_cont_500_bf_scaffold_46958
Species: uncultured bacterium (50%)
2 1374 bp 60.55 38.94 83.41
SCNpilot_cont_500_bf_scaffold_59371
Species: Sphingomonas sp. MM-1 (50%)
2 1132 bp 62.81 29.81 78.45
SCNpilot_cont_500_bf_scaffold_35895
Species: Rhodopseudomonas palustris (50%)
2 1706 bp 63.95 36.64 100.06
SCNpilot_cont_500_bf_scaffold_35902
Species: Nitrospirillum amazonense (50%)
2 1706 bp 58.79 38.25 99.36
SCNpilot_cont_500_bf_scaffold_51095
Species: Microvirga lotononidis (50%)
2 1283 bp 59.94 22.60 90.96
SCNpilot_cont_500_bf_scaffold_57920
Species: R_Alphaproteobacteria_66_14 (50%)
2 1157 bp 65.25 35.87 58.60
SCNpilot_cont_500_bf_scaffold_45914
Species: alpha proteobacterium U9-1i (100%)
2 1400 bp 64.21 25.54 99.21
SCNpilot_cont_500_bf_scaffold_55491
Species: Candidatus Phaeomarinobacter ectocarpi (50%)
2 1201 bp 60.37 42.46 88.18
SCNpilot_cont_500_bf_scaffold_64713
Species: Parvularcula bermudensis (100%)
2 1042 bp 56.43 32.39 94.15
SCNpilot_cont_500_bf_scaffold_28038
Species: Fulvimarina pelagi (50%)
2 2072 bp 64.91 32.58 96.86
SCNpilot_cont_500_bf_scaffold_63084
Species: Methyloceanibacter caenitepidi (50%)
2 2005 bp 58.05 29.18 57.61
SCNpilot_cont_500_bf_scaffold_76761
Species: Oceanibaculum indicum (50%)
2 1504 bp 66.36 29.92 96.34
SCNpilot_cont_500_bf_scaffold_73933
Species: Roseovarius mucosus (50%)
2 2882 bp 54.09 30.97 45.39
SCNpilot_cont_500_bf_scaffold_44979
Species: Sphingomonas sp. WHSC-8 (50%)
2 1944 bp 61.83 30.48 88.89
SCNpilot_cont_500_bf_scaffold_58287
Species: Starkeya novella (50%)
2 1151 bp 65.16 37.58 90.96
SCNpilot_cont_500_bf_scaffold_49088
Species: Oceanibaculum indicum (50%)
2 1325 bp 61.66 37.17 84.00
SCNpilot_cont_500_bf_scaffold_10091
Species: alpha proteobacterium MA2 (50%)
2 4421 bp 61.09 33.53 97.38
SCNpilot_cont_500_bf_scaffold_53800
Species: Sinorhizobium fredii (50%)
2 2395 bp 62.34 26.62 102.34
SCNpilot_cont_500_bf_scaffold_34098
Species: Mesorhizobium huakuii (50%)
2 1779 bp 61.38 34.01 99.49
SCNpilot_cont_500_bf_scaffold_29692
Species: Acetobacteraceae bacterium AT-5844 (50%)
2 1983 bp 60.72 38.45 98.34
Displaying items 1-50 of 368 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.