ggKbase home page

SCNpilot_cont_500_bf_scaffold_4109_8

Organism: SCNPILOT_EXPT_750_P_Plasmid_like_41_35

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(4623..5006)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CF51_SPHS2 similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 127.0
  • Bit_score: 168
  • Evalue 5.90e-39
Helix-turn-helix domain protein {ECO:0000313|EMBL:CDS92097.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 127.0
  • Bit_score: 225
  • Evalue 5.70e-56
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 127.0
  • Bit_score: 168
  • Evalue 1.80e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobacterium sp. PM2-P1-29 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 384
ATGAAAATCGGAAGTAACATTAGTCAGCTAAGGACCGCTCAAAAGATCGAAAAAACTTTTATGGCGCAAGAGCTAAATATCAGTGTAGAAGAATATGAAGCTATCGAAAGGGATGAGAGGGACATAACACTTTCTATGCTTGAAGCAATATCACGTTTATTATCGCTTGAAGTTGCCGATTTGATTACGCTCAATAAACCAATTACAGGGATTAGGAATTTCTTCTTTAATCACAACGGAAATTCGGGTGTAAATATTCATGTGCAGGGAATAGACCAGGAGAAGATTAGGCAGGCATACAAAGAACTTTATGCAGAAGAATTAAACAGGATACCCAAACTGGAAAAACTTTTGCGGCAAAATAATATCGAGTTTGATTTTTGA
PROTEIN sequence
Length: 128
MKIGSNISQLRTAQKIEKTFMAQELNISVEEYEAIERDERDITLSMLEAISRLLSLEVADLITLNKPITGIRNFFFNHNGNSGVNIHVQGIDQEKIRQAYKELYAEELNRIPKLEKLLRQNNIEFDF*