ggKbase home page

SCNpilot_cont_500_bf_scaffold_3193_7

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(6294..7730)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 475.0
  • Bit_score: 863
  • Evalue 1.50e-247
murC; UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 475.0
  • Bit_score: 849
  • Evalue 6.70e-244
  • rbh
UDP-N-acetylmuramate--alanine ligase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E54CB1 similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 478.0
  • Bit_score: 864
  • Evalue 6.40e-248
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1437
ATGATCCGCCGCCTCCACGACACCACCGACCTGGTCCGGGCGTTCCCGCGGGTGCATTTCGTCGGCATCGGCGGCACCGGCATGAGCGGCATCGCCGAGGTGATGCTGACCCTGGGTTATGAAGTCTCCGGCTCGGACAACGCCGACAATGCCGCCACCCGCCGCCTGGCGCGGCTGGGCGCGCGGGTGATGCGCGGGCACTCGGCCGCCAACGTGCTCGGCACCGACTGCGTGGTGGTGTCCAGCGCCATCCGCGAAGACAACCCGGAACTGATGGAGGCGCGCAGCCAGCGCATCCCGATCATGCCGCGCGCGGCGATGCTGGCCGAGCTGATGCGCTTCCGCCGCGGCATCGCCGTGGCCGGCACCCACGGCAAGACCACCACTACCTCGCTGACCGCCGCGGTACTGAGCGAAGGCGGCCTGGACCCGACCTTCGTGATCGGCGGGCAGCTGCTGGCCGCCGGTGCCAACGCCAAGCTCGGCGGTGGGCAGTGGCTGGTGGCCGAAGCCGACGAGAGCGACGGCAGCTTCCTGCGCCTGAACCCGCTGGTAGCGGTGATCACCAATATCGACGCCGACCACCTGGAGAACTACGGCAACGACTTCGCCCGCGTGCAGGCGGCGTTCGCCGAGTTCCTGCAGCGGCTGCCGTTCTACGGGTTGGCGGTGCTGTGCATCGACGATCCGGAAGTGGCCGCGCTGGCGACGCAGACCCCGCGCCACGTGATGACCTACGGCATGAGCGGCAACGCCGACGTGCGCGCCGAGGACGTGGAGCAGGACGGCGCGCGCATGCGCTTCACCCTGCGCCTGCCCGAAGGCAGCAGCGTGCCGGTGACGCTGGCGCTGCCCGGCCGCCACAACGTGCTCAACGCACTGGCCGCCGCCGCCATCGGCTGGCAGCTGGGCGTGGCCCCGGACACCATCGCCGCGGCGCTGGAGAAGTTCGAAGGCGTGGGCCGCCGCTTCAACGACCTGGGCGTGGTCACCACCGCCAAGGGCGCCCGGGTGCGGCTGATCGACGACTACGGCCACCATCCGCGCGAGCTGGCCGCGGTGTTCGCCGCGGCCCGCGGCGGCTGGCCCGAGCAGCGCCTGGTGGTGGCGTTCCAGCCGCATCGCTACAGCCGTACCCGCGACCAGTTCGACGCGTTCGCCGCGGTGCTGTCGGAAGTCGACGCGCTGGTGCTGAGCGAGGTGTACCCGGCCGGCGAGGCACCGATCCCCGGCGCCGATTCGAAGTCGCTGGCCCGCGCCATCCGTGCCCGCGGCCGCAGCGAACCGGTGGTGGTCGGCCATGCCCACGACCTGGTGTCGGTGCTGCCGGACGTGCTGCGCGACGGCGACCTGCTGCTGATGATGGGCGCCGGCGATATCGGCCACGTCGCCCAGCAGATCGCCAGCGGCGGCTTCCAGGAGGCGCGGGACGAATGA
PROTEIN sequence
Length: 479
MIRRLHDTTDLVRAFPRVHFVGIGGTGMSGIAEVMLTLGYEVSGSDNADNAATRRLARLGARVMRGHSAANVLGTDCVVVSSAIREDNPELMEARSQRIPIMPRAAMLAELMRFRRGIAVAGTHGKTTTTSLTAAVLSEGGLDPTFVIGGQLLAAGANAKLGGGQWLVAEADESDGSFLRLNPLVAVITNIDADHLENYGNDFARVQAAFAEFLQRLPFYGLAVLCIDDPEVAALATQTPRHVMTYGMSGNADVRAEDVEQDGARMRFTLRLPEGSSVPVTLALPGRHNVLNALAAAAIGWQLGVAPDTIAAALEKFEGVGRRFNDLGVVTTAKGARVRLIDDYGHHPRELAAVFAAARGGWPEQRLVVAFQPHRYSRTRDQFDAFAAVLSEVDALVLSEVYPAGEAPIPGADSKSLARAIRARGRSEPVVVGHAHDLVSVLPDVLRDGDLLLMMGAGDIGHVAQQIASGGFQEARDE*