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SCNpilot_cont_500_bf_scaffold_3897_6

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 4849..5010

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Xanthomonas campestris RepID=UPI00034B7A0A similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 47.0
  • Bit_score: 62
  • Evalue 1.10e-07
Uncharacterized protein {ECO:0000313|EMBL:KGM51075.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 44.0
  • Bit_score: 67
  • Evalue 4.90e-09
xerD1; tyrosine recombinase similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 45.0
  • Bit_score: 62
  • Evalue 4.60e-08

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Taxonomy

Lysobacter concretionis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 162
ATGCACCTGCTGGAGGCCGGCCACGGTATCCGCACGGTGCCGGCGCTGCCGGGCCACTGGGAGGTGGCGAGCACGCAGATCTGCACGCATGTGCTCGGCCGTGGCACCGGCGGTCTGCCCAGTCCGTTGGACCGATTGCCGGGCGCCGTAAAGCCGATCTGA
PROTEIN sequence
Length: 54
MHLLEAGHGIRTVPALPGHWEVASTQICTHVLGRGTGGLPSPLDRLPGAVKPI*